Difference between revisions of "YrhD"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU27230 yrhD]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 17 kDa, 4.764   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 17 kDa, 4.764   

Revision as of 14:18, 7 August 2012

  • Description: unknown

Gene name yrhD
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yrhD
MW, pI 17 kDa, 4.764
Gene length, protein length 480 bp, 160 aa
Immediate neighbours yrhE, yrhC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YrhD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YrhD expression.png
























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU27230

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • the mRNA is substantially stabilized upon depletion of RNase Y PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J  
RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y. 
Mol Microbiol. 2011 81(6): 1459-1473. 
PubMed:21815947