Difference between revisions of "PutR"

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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional activator  
+
|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional activator ([[PucR family]])
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of proline utilization
 
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of proline utilization
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* '''Catalyzed reaction/ biological activity:''' transcription activation of the proline utilization operon ''[[putB]]-[[putC]]-[[putP]]'' in the presence of proline  {{PubMed|21840319,21964733}}  
 
* '''Catalyzed reaction/ biological activity:''' transcription activation of the proline utilization operon ''[[putB]]-[[putC]]-[[putP]]'' in the presence of proline  {{PubMed|21840319,21964733}}  
  
* '''Protein family:''' cdaR family (according to Swiss-Prot)
+
* '''Protein family:''' [[PucR family]]
  
 
* '''Paralogous protein(s):'''
 
* '''Paralogous protein(s):'''

Revision as of 15:36, 17 July 2012

  • Description: transcriptional activator of the proline utilization operon putB-putC-putP

Gene name putR
Synonyms ycgP, prcR
Essential no
Product transcriptional activator (PucR family)
Function regulation of proline utilization
MW, pI 47 kDa, 5.37
Gene length, protein length 1233 bp, 411 aa
Immediate neighbours putP, ycgQ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcgP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PutR expression.png


























Categories containing this gene/protein

transcription factors and their control, utilization of amino acids

This gene is a member of the following regulons

The PutR regulon:

The gene

Basic information

  • Locus tag: BSU03230

Phenotypes of a mutant

  • no growth with proline as single source of carbon or nitrogen PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: transcription activation of the proline utilization operon putB-putC-putP in the presence of proline PubMed
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s): proline acts as co-activator PubMed
  • Effectors of protein activity: proline activates PutR PubMed

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: constitutively expressed PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed