Difference between revisions of "GerAA"

From SubtiWiki
Jump to: navigation, search
Line 26: Line 26:
 
|colspan="2" | '''Genetic context''' <br/> [[Image:gerAA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:gerAA_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 +
|-
 +
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gerAA_3390782_3392230_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:gerAA_expression.png|500px]]
 
|-
 
|-
 
|}
 
|}
  
 
__TOC__
 
__TOC__
 +
<br/><br/><br/><br/>
 +
<br/><br/><br/><br/>
 +
<br/><br/><br/><br/>
 +
<br/><br/><br/><br/>
 +
<br/><br/><br/><br/>
 +
  
 
<br/><br/>
 
<br/><br/>

Revision as of 08:54, 23 April 2012

  • Description: nutrient receptor, germination response to L-alanine

Gene name gerAA
Synonyms
Essential no
Product nutrient receptor
Function germination response to L-alanine
Interactions involving this protein in SubtInteract: GerAA
MW, pI 53 kDa, 8.801
Gene length, protein length 1446 bp, 482 aa
Immediate neighbours yvzF, gerAB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
GerAA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GerAA expression.png
























Categories containing this gene/protein

germination, membrane proteins

This gene is a member of the following regulons

SigF regulon, SigG regulon, SpoVT regulon

The gene

Basic information

  • Locus tag: BSU33050

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: gerABKA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the forespore (SigF, SigG, SpoVT) PubMed
    • expression level depends on sporulation conditions (medim composition, temperature) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed