Difference between revisions of "YubB"

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|colspan="2" | '''Genetic context''' <br/> [[Image:yubB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yubB_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=uppP_3194635_3195465_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yubB_expression.png|500px]]
 
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Revision as of 08:01, 23 April 2012

  • Description: undecaprenyl-diphosphatase

Gene name yubB
Synonyms uppP
Essential no
Product undecaprenyl-diphosphatase
Function unknown
Metabolic function and regulation of this protein in SubtiPathways:
Cell wall
MW, pI 30 kDa, 7.902
Gene length, protein length 828 bp, 276 aa
Immediate neighbours trnSL-Ala1, yubA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YubB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YubB expression.png




























Categories containing this gene/protein

membrane proteins, poorly characterized/ putative enzymes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU31150

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Undecaprenyl diphosphate + H2O = undecaprenyl phosphate + phosphate (according to Swiss-Prot)
  • Protein family: uppP family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: membrane associated PubMed

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711] [WorldCat.org] [DOI] (I p)