Difference between revisions of "YpfD"

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|colspan="2" | '''Genetic context''' <br/> [[Image:ypfD_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ypfD_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ypfD_2394664_2395812_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:ypfD_expression.png|500px]]
 
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Revision as of 12:14, 19 April 2012

Gene name ypfD
Synonyms jofD
Essential no
Product unknown
Function unknown
MW, pI 42 kDa, 4.569
Gene length, protein length 1146 bp, 382 aa
Immediate neighbours fni, cmk
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YpfD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YpfD expression.png
























Categories containing this gene/protein

translation, phosphoproteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU22880

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: ribosomal protein S1P family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylation on Ser-243 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • The mRNA has a long 5' leader region. This may indicate RNA-based regulation PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References