Difference between revisions of "Ndh"

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|colspan="2" | '''Genetic context''' <br/> [[Image:yjlD_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yjlD_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ndh_1299074_1300252_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:ndh_expression.png|500px]]
 
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Revision as of 07:36, 19 April 2012

  • Description: NADH dehydrogenase (Menaquinone 7 & no proton)

Gene name ndh
Synonyms yjlD
Essential no
Product NADH dehydrogenase (Menaquinone 7 & no proton)
Function respiration
Interactions involving this protein in SubtInteract: Ndh
MW, pI 41 kDa, 6.289
Gene length, protein length 1176 bp, 392 aa
Immediate neighbours yjlC, uxaC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YjlD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
Ndh expression.png
























Categories containing this gene/protein

respiration, membrane proteins

This gene is a member of the following regulons

Rex regulon, stringent response

The gene

Basic information

  • Locus tag: BSU12290

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: NADH dehydrogenase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
    • induced under anaerobic conditions (Rex) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References