Difference between revisions of "GerBA"

From SubtiWiki
Jump to: navigation, search
(References)
Line 102: Line 102:
 
* '''Operon:''' ''[[gerBA]]-[[gerBB]]-[[gerBC]]'' {{PubMed|8012571}}
 
* '''Operon:''' ''[[gerBA]]-[[gerBB]]-[[gerBC]]'' {{PubMed|8012571}}
  
* '''[[Sigma factor]]:''' [[SigG]] {{PubMed|15699190,8012571}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gerBA_3688812_3690263_1 gerBA] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigG]] {{PubMed|15699190,8012571}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
Line 109: Line 111:
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 07:48, 17 April 2012

  • Description: nutrient receptor, germination response to the combination of glucose, fructose, and KCl

Gene name gerBA
Synonyms
Essential no
Product nutrient receptor
Function germination response to the combination of glucose, fructose, and KCl
Interactions involving this protein in SubtInteract: GerBA
MW, pI 53 kDa, 7.295
Gene length, protein length 1446 bp, 482 aa
Immediate neighbours pmi, gerBB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
GerBA context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

germination, membrane proteins

This gene is a member of the following regulons

SigG regulon

The gene

Basic information

  • Locus tag: BSU35800

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: gerABKA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the forespore (SigG) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed