Difference between revisions of "YoxC"

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* '''Operon:''' ''[[yoxC]]-[[yoxB]]-[[yoaA]]'' {{PubMed|10482513}}
 
* '''Operon:''' ''[[yoxC]]-[[yoxB]]-[[yoaA]]'' {{PubMed|10482513}}
  
* '''[[Sigma factor]]:''' [[SigB]] {{PubMed|10482513,15805528}}
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yoxC_2019421_2019726_1 yoxC] {{PubMed|22383849}}
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* '''Sigma factor:''' [[SigB]] {{PubMed|10482513,15805528}}
  
 
* '''Regulation:'''   
 
* '''Regulation:'''   
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* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 10:06, 13 April 2012

  • Description: general stress protein, survival of ethanol stress

Gene name yoxC
Synonyms
Essential no
Product unknown
Function survival of ethanol stress
MW, pI 11 kDa, 10.019
Gene length, protein length 303 bp, 101 aa
Immediate neighbours yoxD, yoxB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YoxC context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

general stress proteins (controlled by SigB)

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU18510

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: short-chain dehydrogenases/reductases (SDR) family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

A Petersohn, J Bernhardt, U Gerth, D Höper, T Koburger, U Völker, M Hecker
Identification of sigma(B)-dependent genes in Bacillus subtilis using a promoter consensus-directed search and oligonucleotide hybridization.
J Bacteriol: 1999, 181(18);5718-24
[PubMed:10482513] [WorldCat.org] [DOI] (P p)