Difference between revisions of "XynP"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
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* '''Operon:''' ''[[xynP]]-[[xynB]]'' (according to [http://dbtbs.hgc.jp/COG/prom/xynPB.html DBTBS])
 
* '''Operon:''' ''[[xynP]]-[[xynB]]'' (according to [http://dbtbs.hgc.jp/COG/prom/xynPB.html DBTBS])
  
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|9973552}}
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=xynP_1887352_1888743_1 xynP] {{PubMed|22383849}}
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* '''Sigma factor:''' [[SigA]] {{PubMed|9973552}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 09:39, 13 April 2012

  • Description: beta-xyloside permease

Gene name xynP
Synonyms ynaJ
Essential no
Product beta-xyloside permease
Function xylan utilization
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 51 kDa, 8.579
Gene length, protein length 1389 bp, 463 aa
Immediate neighbours ynaI, xynB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
XynP context.gif
This image was kindly provided by SubtiList







Categories containing this gene/protein

transporters/ other, utilization of specific carbon sources, membrane proteins

This gene is a member of the following regulons

CcpA regulon, XylR regulon

The gene

Basic information

  • Locus tag: BSU17570

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion: pGP417 (in pAC7), available in Stülke lab
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Carbon catabolite repression

Frederik M Meyer, Matthieu Jules, Felix M P Mehne, Dominique Le Coq, Jens J Landmann, Boris Görke, Stéphane Aymerich, Jörg Stülke
Malate-mediated carbon catabolite repression in Bacillus subtilis involves the HPrK/CcpA pathway.
J Bacteriol: 2011, 193(24);6939-49
[PubMed:22001508] [WorldCat.org] [DOI] (I p)

Kalpana D Singh, Matthias H Schmalisch, Jörg Stülke, Boris Görke
Carbon catabolite repression in Bacillus subtilis: quantitative analysis of repression exerted by different carbon sources.
J Bacteriol: 2008, 190(21);7275-84
[PubMed:18757537] [WorldCat.org] [DOI] (I p)

A Galinier, J Deutscher, I Martin-Verstraete
Phosphorylation of either crh or HPr mediates binding of CcpA to the bacillus subtilis xyn cre and catabolite repression of the xyn operon.
J Mol Biol: 1999, 286(2);307-14
[PubMed:9973552] [WorldCat.org] [DOI] (P p)