Difference between revisions of "YitC"
m (Reverted edits by 134.76.70.252 (talk) to last revision by Lflorez) |
|||
Line 100: | Line 100: | ||
* '''Operon:''' ''[[yitC]]-[[yitD]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yitCD.html DBTBS]) | * '''Operon:''' ''[[yitC]]-[[yitD]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yitCD.html DBTBS]) | ||
− | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yitC_1172650_1173336_1 yitC] {{PubMed|22383849}} |
+ | |||
+ | * '''Sigma factor:''' [[SigE]] {{PubMed|15383836}}, [[SigK]] {{PubMed|15699190,15383836}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
Line 107: | Line 109: | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
− | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = |
Revision as of 17:32, 12 April 2012
- Description: mother cell-specific sporulation protein
Gene name | yitC |
Synonyms | |
Essential | no |
Product | unknown |
Function | unknown |
MW, pI | 24 kDa, 5.216 |
Gene length, protein length | 684 bp, 228 aa |
Immediate neighbours | yitB, yitD |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU10940
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O06738
- KEGG entry: [3]
- E.C. number:
Additional information
The gene is annotated in KEGG as ortholog of 2-phosphosulfolactate phosphatase EC 3.1.3.71. In Swiss-Prot the protein is marked as “probable 2-phosphosulfolactate phosphatase”. No EC annotation is available in MeMetaCyc.No literature/experimental evidence supporting the annotation is available. PubMed
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836]
[WorldCat.org]
[DOI]
(I p)