YodR

• Description: similar to butyrate-acetoacetate CoA-transferase
  
  

Gene name	yodR
Synonyms
Essential	no
Product	unknown
Function	unknown
MW, pI	23 kDa, 6.107
Gene length, protein length	651 bp, 217 aa
Immediate neighbours	yodQ, yodS
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList

Categories containing this gene/protein

sporulation proteins, poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

• Locus tag: BSU19720

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity: Butanoyl-CoA + acetoacetate = butanoate + acetoacetyl-CoA (according to Swiss-Prot)

• Protein family: cry6A endotoxin family (according to Swiss-Prot)

• Paralogous protein(s): ScoB

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: O34466

• KEGG entry: [2]

• E.C. number: 2.8.3.9

Expression and regulation

• Operon: yodT-yodS-yodR-yodQ-yodP-kamA-yokU PubMed

• Expression browser: yodR PubMed

• Sigma factor: SigE PubMed

• Regulation: expressed early during sporuation in the mother cell (SigE) PubMed

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Andrea Feucht, Louise Evans, Jeff Errington
Identification of sporulation genes by genome-wide analysis of the sigmaE regulon of Bacillus subtilis.
Microbiology (Reading): 2003, 149(Pt 10);3023-3034
[PubMed:14523133] [WorldCat.org] [DOI] (P p)