Difference between revisions of "YrvJ"
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* '''Operon:''' ''yrvJ'' {{PubMed|9383190}} | * '''Operon:''' ''yrvJ'' {{PubMed|9383190}} | ||
| − | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yrvJ_2818494_2820050_1 yrvJ] {{PubMed|22383849}} |
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| + | * '''Sigma factor:''' | ||
* '''Regulation:''' | * '''Regulation:''' | ||
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* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 14:10, 16 April 2012
- Description: similar to N-acetylmuramoyl-L-alanine amidase
| Gene name | yrvJ |
| Synonyms | |
| Essential | no |
| Product | peptidoglycan hydrolase |
| Function | cell wall metabolism |
| MW, pI | 55 kDa, 5.192 |
| Gene length, protein length | 1554 bp, 518 aa |
| Immediate neighbours | yrzK, yrvI |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU27580
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides (according to Swiss-Prot)
- Protein family: N-acetylmuramoyl-L-alanine amidase 3 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O32041
- KEGG entry: [3]
- E.C. number: 3.5.1.28
Additional information
Expression and regulation
- Operon: yrvJ PubMed
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
