Difference between revisions of "YlaG"

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* '''Locus tag:''' BSU14770
 
* '''Locus tag:''' BSU14770
 
[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=bipA_1546121_1547959_1 Expression]
 
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===

Revision as of 12:34, 26 January 2012

  • Description: similar to GTP-binding elongation factor

Gene name ylaG
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 68 kDa, 4.974
Gene length, protein length 1836 bp, 612 aa
Immediate neighbours ylaF, ylaH
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YlaG context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

translation, cold stress proteins

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU14770

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: TypA subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
    • induced by cold shock (3.3-fold) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Carsten L Beckering, Leif Steil, Michael H W Weber, Uwe Völker, Mohamed A Marahiel
Genomewide transcriptional analysis of the cold shock response in Bacillus subtilis.
J Bacteriol: 2002, 184(22);6395-402
[PubMed:12399512] [WorldCat.org] [DOI] (P p)

Christine Eymann, Georg Homuth, Christian Scharf, Michael Hecker
Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis.
J Bacteriol: 2002, 184(9);2500-20
[PubMed:11948165] [WorldCat.org] [DOI] (P p)