Difference between revisions of "YkfB"

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* '''Locus tag:''' BSU12980
 
* '''Locus tag:''' BSU12980
 
[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ykfB_1366844_1367944_1 Expression]
 
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===

Revision as of 12:39, 26 January 2012

  • Description: L-Ala-D/L-Glu epimerase

Gene name ykfB
Synonyms
Essential no
Product L-Ala-D/L-Glu epimerase
Function cell wall metabolism
MW, pI 39 kDa, 5.905
Gene length, protein length 1098 bp, 366 aa
Immediate neighbours ykfA, ykfC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YkfB context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

cell wall/ other

This gene is a member of the following regulons

CodY regulon

The gene

Basic information

  • Locus tag: BSU12980

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 1TKK (complex with substrate), 1JPM
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulatory mechanism: CodY: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References