Difference between revisions of "PadR"
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=The protein= | =The protein= |
Revision as of 20:43, 27 January 2012
- Description: repressor of yveF-yveG-padC, induction occurs by binding of phenolic acids,stress response
Gene name | padR |
Synonyms | yfiO |
Essential | no |
Product | transcriptional repressor |
Function | regulation of the phenolic acid stress response |
MW, pI | 21 kDa, 7.231 |
Gene length, protein length | 546 bp, 182 aa |
Immediate neighbours | yfiN, lipB |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
transcription factors and their control, resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)
This gene is a member of the following regulons
The PadR regulon:
The gene
Basic information
- Locus tag: BSU08340
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity: phenolic acid acts as molecular inducer and releases PadR from the yveF-yveG-padC promoter PubMed
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P94443
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: padR (according to DBTBS)
- Regulation: weak constitutive expression
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References