Difference between revisions of "TcyJ"

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(Extended information on the protein)
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* '''Operon:''' ''[[ytmI]]-[[tcyJ]]-[[tcyK]]-[[tcyL]]-[[tcyM]]-[[tcyN]]-[[ytmO]]-[[ytnI]]-[[ytnJ]]-[[ribR]]-[[ytnL]]-[[ytnM]]'' {{PubMed|15668000}}
 
* '''Operon:''' ''[[ytmI]]-[[tcyJ]]-[[tcyK]]-[[tcyL]]-[[tcyM]]-[[tcyN]]-[[ytmO]]-[[ytnI]]-[[ytnJ]]-[[ribR]]-[[ytnL]]-[[ytnM]]'' {{PubMed|15668000}}
  
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|15272571}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=tcyJ_3007426_3008235_-1 tcyJ] {{PubMed|22383849}}
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 +
* '''Sigma factor:''' [[SigA]] {{PubMed|15272571}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 15:14, 16 April 2012

Gene name tcyJ
Synonyms ytmJ
Essential no
Product cystine ABC transporter (binding protein)
Function cystine uptake
Interactions involving this protein in SubtInteract: TcyJ
Metabolic function and regulation of this protein in SubtiPathways:
Riboflavin / FAD
MW, pI 30 kDa, 9.602
Gene length, protein length 807 bp, 269 aa
Immediate neighbours tcyK, ytmI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtmJ context.gif
This image was kindly provided by SubtiList







Categories containing this gene/protein

ABC transporters, biosynthesis/ acquisition of amino acids, membrane proteins

This gene is a member of the following regulons

CymR regulon, YtlI regulon

The gene

Basic information

  • Locus tag: BSU29380

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: bacterial solute-binding protein 3 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed in the presence of cysteine (CymR) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed