Difference between revisions of "PheT"
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* '''Operon:''' ''[[pheS]]-[[pheT]]'' {{PubMed|2127701}} | * '''Operon:''' ''[[pheS]]-[[pheT]]'' {{PubMed|2127701}} | ||
− | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=pheT_2927008_2929422_-1 pheT] {{PubMed|22383849}} |
+ | |||
+ | * '''Sigma factor:''' [[SigA]] {{PubMed|2127701}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
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* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
− | ** [[T-box]]: [[RNA switch]], transcriptional antitermination {{PubMed|19258532}} | + | ** [[T-box]]: [[RNA switch]], transcriptional antitermination {{PubMed|19258532}} |
=Biological materials = | =Biological materials = |
Revision as of 14:48, 16 April 2012
- Description: phenylalanyl-tRNA synthetase (beta subunit)
Gene name | pheT |
Synonyms | |
Essential | yes PubMed |
Product | phenylalanyl-tRNA synthetase (beta subunit) |
Function | translation |
Interactions involving this protein in SubtInteract: PheT | |
Metabolic function and regulation of this protein in SubtiPathways: tRNA charging | |
MW, pI | 87 kDa, 4.864 |
Gene length, protein length | 2412 bp, 804 aa |
Immediate neighbours | rnhC, pheS |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU28630
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe) (according to Swiss-Prot)
- Protein family: Type 1 subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- UniProt: P17922
- KEGG entry: [3]
- E.C. number: 6.1.1.20
Additional information
Expression and regulation
- Regulatory mechanism:
- T-box: RNA switch, transcriptional antitermination PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Ana Gutiérrez-Preciado, Tina M Henkin, Frank J Grundy, Charles Yanofsky, Enrique Merino
Biochemical features and functional implications of the RNA-based T-box regulatory mechanism.
Microbiol Mol Biol Rev: 2009, 73(1);36-61
[PubMed:19258532]
[WorldCat.org]
[DOI]
(I p)
A A Brakhage, M Wozny, H Putzer
Structure and nucleotide sequence of the Bacillus subtilis phenylalanyl-tRNA synthetase genes.
Biochimie: 1990, 72(10);725-34
[PubMed:2127701]
[WorldCat.org]
[DOI]
(P p)