Difference between revisions of "Int"

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(Extended information on the protein)
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* '''Locus tag:''' BSU04800
 
* '''Locus tag:''' BSU04800
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[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydcL_529505_530611_-1 Expression]
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===

Revision as of 14:15, 24 January 2012

  • Description: integrase

Gene name int
Synonyms ydcL
Essential no
Product integrase
Function excision of the conjugative transposon
ICEBs1 from the trnS-leu2 locus
MW, pI 43 kDa, 9.764
Gene length, protein length 1104 bp, 368 aa
Immediate neighbours trnS-Leu2, immA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdcL context.gif
This image was kindly provided by SubtiList




Categories containing this gene/protein

mobile genetic elements

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU04800

Expression

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: 'phage' integrase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Catherine A Lee, Jennifer M Auchtung, Rita E Monson, Alan D Grossman
Identification and characterization of int (integrase), xis (excisionase) and chromosomal attachment sites of the integrative and conjugative element ICEBs1 of Bacillus subtilis.
Mol Microbiol: 2007, 66(6);1356-69
[PubMed:18005101] [WorldCat.org] [DOI] (P p)