Difference between revisions of "PutR"
| Line 77: | Line 77: | ||
* '''Modification:''' | * '''Modification:''' | ||
| − | * '''Cofactor(s):''' | + | * '''Cofactor(s):''' proline acts as co-activator {{PubMed|21840319}} |
| − | * '''Effectors of protein activity:''' | + | * '''Effectors of protein activity:''' proline activates PutR {{PubMed|21840319}} |
* '''Interactions:''' | * '''Interactions:''' | ||
| − | * '''Localization:''' | + | * '''[[Localization]]:''' |
=== Database entries === | === Database entries === | ||
| Line 99: | Line 99: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''[[putR]]'' {{PubMed|21840319}} |
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
| − | * '''Regulation:''' | + | * '''Regulation:''' constitutively expressed {{PubMed|21840319}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
Revision as of 16:01, 17 August 2011
| Gene name | ycgP |
| Synonyms | |
| Essential | no |
| Product | transcriptional activator |
| Function | regulation of proline utilization |
| MW, pI | 47 kDa, 5.37 |
| Gene length, protein length | 1233 bp, 411 aa |
| Immediate neighbours | putP, ycgQ |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
transcription factors and their control proteins of unknown function
This gene is a member of the following regulons
The PutR regulon:
The gene
Basic information
- Locus tag: BSU03230
Phenotypes of a mutant
- no growth with proline as single source of carbon or nitrogen PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: cdaR family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s): proline acts as co-activator PubMed
- Effectors of protein activity: proline activates PutR PubMed
- Interactions:
Database entries
- Structure:
- UniProt: P94393
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation: constitutively expressed PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Boris R Belitsky
Indirect repression by Bacillus subtilis CodY via displacement of the activator of the proline utilization operon.
J Mol Biol: 2011, 413(2);321-36
[PubMed:21840319]
[WorldCat.org]
[DOI]
(I p)
