Difference between revisions of "Xpf"
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* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' [[Xpf]]-([[RpoB]]-[[RpoC]]) | + | * '''[[SubtInteract|Interactions]]:''' |
| + | ** [[Xpf]]-([[RpoB]]-[[RpoC]]) | ||
| − | * '''Localization:''' | + | * '''[[Localization]]:''' |
=== Database entries === | === Database entries === | ||
Revision as of 09:28, 2 November 2011
- Description: PBSX phage RNA polymerase sigma factor
| Gene name | xpf |
| Synonyms | pcf, ykxE |
| Essential | no |
| Product | PBSX prophage RNA polymerase sigma factor |
| Function | transcription of PBSX prophage genes |
| Interactions involving this protein in SubtInteract: Xpf | |
| MW, pI | 19 kDa, 8.084 |
| Gene length, protein length | 507 bp, 169 aa |
| Immediate neighbours | xtrA, xtmA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
transcription, sigma factors and their control, PBSX prophage
This gene is a member of the following regulons
The Xpf regulon:
The gene
Basic information
- Locus tag: BSU12560
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P39784
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
