Difference between revisions of "YokL"

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(This gene is a member of the following regulons)
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 531 bp, 177 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 531 bp, 177 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bsrG]]'', ''[[yokK]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[SR4]]'', ''[[yokK]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14073&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14073&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''

Revision as of 16:01, 11 January 2012

  • Description: similar to phage-related protein

Gene name yokL
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 20 kDa, 4.782
Gene length, protein length 531 bp, 177 aa
Immediate neighbours SR4, yokK
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YokL context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

SP-beta prophage

This gene is a member of the following regulons

AbrB regulon

The gene

Basic information

  • Locus tag: BSU21550

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: sleB family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

Irnov Irnov, Cynthia M Sharma, Jörg Vogel, Wade C Winkler
Identification of regulatory RNAs in Bacillus subtilis.
Nucleic Acids Res: 2010, 38(19);6637-51
[PubMed:20525796] [WorldCat.org] [DOI] (I p)