Difference between revisions of "XynA"
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Additional information:''' | * '''Additional information:''' | ||
| + | ** A [[ncRNA]] is predicted between ''[[pps]]'' and ''[[xynA]]'' {{PubMed|20525796}} | ||
=Biological materials = | =Biological materials = | ||
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<pubmed>20735481 </pubmed> | <pubmed>20735481 </pubmed> | ||
==Original publications== | ==Original publications== | ||
| − | <pubmed>19531602 ,8012596, 18957862, 19422059 19994888 20096384 20188130 21466172 </pubmed> | + | <pubmed>19531602 ,8012596, 18957862, 19422059 19994888 20096384 20188130 21466172 8628241 20525796</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 18:54, 4 May 2011
- Description: endo-1,4-beta-xylanase
| Gene name | xynA |
| Synonyms | |
| Essential | no |
| Product | endo-1,4-beta-xylanase |
| Function | xylan degradation |
| Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
| MW, pI | 23 kDa, 9.644 |
| Gene length, protein length | 639 bp, 213 aa |
| Immediate neighbours | pps, yobD |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
utilization of specific carbon sources
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU18840
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans (according to Swiss-Prot)
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: extracellular (signal peptide) PubMed
Database entries
- UniProt: P18429
- KEGG entry: [3]
- E.C. number: 3.2.1.8
Additional information
Expression and regulation
- Operon: xynA PubMed
- Regulation:
- constitutively expressed PubMed
- Regulatory mechanism:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Massimiliano Marvasi, Pieter T Visscher, Lilliam Casillas Martinez
Exopolymeric substances (EPS) from Bacillus subtilis: polymers and genes encoding their synthesis.
FEMS Microbiol Lett: 2010, 313(1);1-9
[PubMed:20735481]
[WorldCat.org]
[DOI]
(I p)
Original publications
