Difference between revisions of "CshB"

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(Basic information/ Evolution)
(Basic information/ Evolution)
Line 56: Line 56:
 
* '''Protein family:''' DEAD-box RNA helicase
 
* '''Protein family:''' DEAD-box RNA helicase
  
* '''Paralogous protein(s):''' [[CshA]], [[CshB]], [[DeaD]], [[YfmL]]
+
* '''Paralogous protein(s):''' [[CshA]], [[DeaD]], [[YfmL]]
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===

Revision as of 17:16, 9 February 2009

  • Description: write here

Gene name cshB
Synonyms yqfR
Essential
Product
Function unknown
MW, pI 49 kDa, 9.89
Gene length, protein length 1314 bp, 438 aa
Immediate neighbours
Gene sequence (+200bp) Protein sequence
Genetic context
YqfR context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: RNA helicase
  • Protein family: DEAD-box RNA helicase

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: cytoplasma, colocalizes with the ribosomes PubMed

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system: B. pertussis adenylate cyclase-based bacterial two hybrid system (BACTH), available in Stülke lab
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Hunger, K., Beckering, C. L., Wiegeshoff, F., Graumann, P. L. & Marahiel, M. A. (2006). Cold-induced putative DEAD box RNA helicases CshA and CshB are essential for cold adaptation and interact with cold shock protein B in Bacillus subtilis. J Bacteriol. 188:240-248. PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed