Difference between revisions of "QdoI"
| Line 18: | Line 18: | ||
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1011 bp, 337 aa | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1011 bp, 337 aa | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yxaH]]'', ''[[ | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yxaH]]'', ''[[qdoR]]'' |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB16035]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB16035]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' | ||
| Line 36: | Line 36: | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
{{SubtiWiki regulon|[[LmrA regulon]]}}, | {{SubtiWiki regulon|[[LmrA regulon]]}}, | ||
| − | {{SubtiWiki regulon|[[ | + | {{SubtiWiki regulon|[[QdoR regulon]]}} |
=The gene= | =The gene= | ||
| Line 53: | Line 53: | ||
=== Additional information=== | === Additional information=== | ||
| − | |||
| − | |||
| Line 101: | Line 99: | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** induced by flavonoids such as quercetin ([[ | + | ** induced by flavonoids such as quercetin ([[QdoR]], [[LmrA]]) {{PubMed|17483215}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
** [[LmrA]]: transcription repression {{PubMed|15317768}} | ** [[LmrA]]: transcription repression {{PubMed|15317768}} | ||
| − | ** [[ | + | ** [[QdoR]]: transcription repression {{PubMed|17483215}} |
* '''Additional information:''' | * '''Additional information:''' | ||
Revision as of 17:20, 10 July 2011
- Description: Fe-containing quercetin 2,3-dioxygenase
| Gene name | qdoI |
| Synonyms | yxaG |
| Essential | no |
| Product | Fe-containing quercetin 2,3-dioxygenase |
| Function | resistance to plant product quercetin |
| MW, pI | 37,4 kDa, 5.562 |
| Gene length, protein length | 1011 bp, 337 aa |
| Immediate neighbours | yxaH, qdoR |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU39980
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Quercetin + O2 = 2-(3,4-dihydroxybenzoyloxy)-4,6-dihydroxybenzoate + CO + H+ (according to Swiss-Prot)
- Protein family:bicupin family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s): Fe(2+)
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 2H0V
- UniProt: P42106
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
