Difference between revisions of "YvyC"

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* '''Operon:''' ''[[yvyC]]-[[fliD]]-[[fliS]]-[[fliT]]'' {{PubMed|8195064}}  
 
* '''Operon:''' ''[[yvyC]]-[[fliD]]-[[fliS]]-[[fliT]]'' {{PubMed|8195064}}  
  
* '''[[Sigma factor]]:''' [[SigD]] {{PubMed|8195064}}  
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yvyC_3634425_3634754_-1 yvyC] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigD]] {{PubMed|8195064}}  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 07:34, 17 April 2012

  • Description: similar to flagellar protein

Gene name yvyC
Synonyms yviH
Essential no
Product unknown
Function unknown
MW, pI 12 kDa, 4.698
Gene length, protein length 327 bp, 109 aa
Immediate neighbours fliD, hag
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvyC context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

motility and chemotaxis

This gene is a member of the following regulons

SigD regulon

The gene

Basic information

  • Locus tag: BSU35350

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 2HC5 (NMR)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Alexander Eletsky, Dinesh K Sukumaran, Rong Xiao, Thomas B Acton, Burkhard Rost, Gaetano T Montelione, Thomas Szyperski
NMR structure of protein YvyC from Bacillus subtilis reveals unexpected structural similarity between two PFAM families.
Proteins: 2009, 76(4);1037-41
[PubMed:19455708] [WorldCat.org] [DOI] (I p)

L Chen, J D Helmann
The Bacillus subtilis sigma D-dependent operon encoding the flagellar proteins FliD, FliS, and FliT.
J Bacteriol: 1994, 176(11);3093-101
[PubMed:8195064] [WorldCat.org] [DOI] (P p)