Difference between revisions of "RodZ"

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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[cell shape]]}}
+
{{SubtiWiki category|[[cell shape]]}},
 +
{{SubtiWiki category|[[membrane proteins]]}}
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
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=== Additional information===
 
=== Additional information===
 
 
  
  
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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
+
* '''[[SubtInteract|Interactions]]:'''
 +
** part of the [[cell wall biosynthetic complex]] {{PubMed|21636744,21636745}}
  
* '''Localization:'''
+
* '''Localization:''' membrane protein (according to Swiss Prot)
  
 
=== Database entries ===
 
=== Database entries ===
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=References=
 
=References=
  
<pubmed>19164570, </pubmed>
+
<pubmed>19164570, 21636744,21636745</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 05:21, 11 July 2011

  • Description: required for cell shape determination

Gene name rodZ
Synonyms ymfM
Essential no
Product morphogenic protein
Function required for cell shape determination
MW, pI 23 kDa, 4.679
Gene length, protein length 639 bp, 213 aa
Immediate neighbours ymfL, pgsA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YmfM context.gif
This image was kindly provided by SubtiList





Categories containing this gene/protein

cell shape, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU16910

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: membrane protein (according to Swiss Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

overexpression results in growth inhibition in minimal medium (in the absence of Mg2+ ) PubMed

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Adriano Henriques, Lisbon, Portugal homepage

Your additional remarks

References