Difference between revisions of "PdaC"

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= [[Categories]] containing this gene/protein =
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{{SubtiWiki category|[[cell wall/ other]]}}
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= This gene is a member of the following [[regulons]] =
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{{SubtiWiki regulon|[[WalR regulon]]}}
  
 
=The gene=
 
=The gene=
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= Categories containing this gene/protein =
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{{SubtiWiki category|[[cell wall/ other]]}}
 
 
=The protein=
 
=The protein=
  

Revision as of 18:39, 8 December 2010

  • Description: extracellular Dnase, peptidoglycan deacetylase

Gene name yjeA
Synonyms
Essential no
Product extracellular Dnase
Function degradation of DNA
MW, pI 53 kDa, 9.105
Gene length, protein length 1401 bp, 467 aa
Immediate neighbours cotT, yjfA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YjeA context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

cell wall/ other

This gene is a member of the following regulons

WalR regulon

The gene

Basic information

  • Locus tag: BSU12100

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: polysaccharide deacetylase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Ka-Lun Ng, Chui-Chi Lam, Zhibiao Fu, Yi-Fan Han, Karl W K Tsim, Wan-Keung R Wong
Cloning and characterization of the yjeA gene, encoding a novel deoxyribonuclease, from Bacillus subtilis.
J Biochem: 2007, 142(5);647-54
[PubMed:17878218] [WorldCat.org] [DOI] (P p)

Paola Bisicchia, David Noone, Efthimia Lioliou, Alistair Howell, Sarah Quigley, Thomas Jensen, Hanne Jarmer, Kevin M Devine
The essential YycFG two-component system controls cell wall metabolism in Bacillus subtilis.
Mol Microbiol: 2007, 65(1);180-200
[PubMed:17581128] [WorldCat.org] [DOI] (P p)