Difference between revisions of "XynC"
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=Expression and regulation= | =Expression and regulation= | ||
| − | + | * '''Operon:''' ''[[xynD]]-[[xynC]]'' {{PubMed|20817675}} | |
| − | * '''Operon:''' | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
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* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[AbrB]]: transcription repression {{PubMed|20817675}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
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<pubmed>20735481 </pubmed> | <pubmed>20735481 </pubmed> | ||
==Original publications== | ==Original publications== | ||
| − | <pubmed>19407387,, 18957862, 17028274 </pubmed> | + | <pubmed>19407387,, 18957862, 17028274 20817675</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 19:36, 15 September 2010
- Description: endo-xylanase, preference for methylglucurono-xylan
| Gene name | xynC |
| Synonyms | ynfF |
| Essential | no |
| Product | endo-xylanase |
| Function | xylan degradation |
| MW, pI | 47 kDa, 9.078 |
| Gene length, protein length | 1266 bp, 422 aa |
| Immediate neighbours | ynfE, xynD |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU18150
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Endohydrolysis of (1->4)-beta-D-xylosyl links in some glucuronoarabinoxylans (according to Swiss-Prot)
- Protein family: glycosyl hydrolase 30 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: secreted (according to Swiss-Prot), extracellular (signal peptide) PubMed
Database entries
- Structure: 3GTN
- UniProt: Q45070
- KEGG entry: [2]
- E.C. number: 3.2.1.136
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Original publications
