Difference between revisions of "NrgB"

From SubtiWiki
Jump to: navigation, search
(References)
(Expression and regulation)
Line 90: Line 90:
  
 
=Expression and regulation=
 
=Expression and regulation=
 +
* '''Operon:''' ''[[nrgA]]-[[nrgB]]'' {{PubMed|8282685}}
  
* '''Operon:''' ''[[nrgA]]-[[nrgB]]''
+
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|8282685}}
 
 
* '''[[Sigma factor]]:''' [[SigA]]
 
  
 
* '''Regulation:''' induced by ammonium limitation
 
* '''Regulation:''' induced by ammonium limitation
** expressed in the absence of good nitrogen sources (glutamine or ammonium) ([[TnrA]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/8799114 PubMed]
+
** induced by ammonium limitation ([[TnrA]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/8799114 PubMed]
  
* '''Regulatory mechanism:''' transcription activation by [[TnrA]]
+
* '''Regulatory mechanism:'''  
 
** [[TnrA]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/8799114 PubMed]
 
** [[TnrA]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/8799114 PubMed]
  

Revision as of 22:50, 29 January 2010

  • Description: nitrogen-regulated PII-like protein

Gene name nrgB
Synonyms glnK
Essential no
Product nitrogen-regulated PII-like protein
Function regulation of ammonium uptake
Metabolic function and regulation of this protein in SubtiPathways:
Ammonium/ glutamate
MW, pI 12 kDa, 8.825
Gene length, protein length 348 bp, 116 aa
Immediate neighbours nrgA, bcrC
Gene sequence (+200bp) Protein sequence
Genetic context
NrgB context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU36520

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: P(II) protein family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: cell membrane (according to Swiss-Prot), membrane

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: induced by ammonium limitation
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant: GP259 (cat), GP255 (nrgAB, cat), both available in the Stülke lab
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:

Labs working on this gene/protein

Susan Fisher, Boston, USA homepage

Your additional remarks

References

Reviews

Karl Forchhammer
P(II) signal transducers: novel functional and structural insights.
Trends Microbiol: 2008, 16(2);65-72
[PubMed:18182294] [WorldCat.org] [DOI] (P p)

T Arcondéguy, R Jack, M Merrick
P(II) signal transduction proteins, pivotal players in microbial nitrogen control.
Microbiol Mol Biol Rev: 2001, 65(1);80-105
[PubMed:11238986] [WorldCat.org] [DOI] (P p)

G Thomas, G Coutts, M Merrick
The glnKamtB operon. A conserved gene pair in prokaryotes.
Trends Genet: 2000, 16(1);11-4
[PubMed:10637624] [WorldCat.org] [DOI] (P p)

Original publications