Difference between revisions of "PgdS"
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* '''Operon:''' ''pgdS'' {{PubMed|15033535}} | * '''Operon:''' ''pgdS'' {{PubMed|15033535}} | ||
| − | * '''[[Sigma factor]]:''' | + | * '''[[Sigma factor]]:''' [[SigD]] {{PubMed|15033535}} |
* '''Regulation:''' | * '''Regulation:''' | ||
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* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 10:03, 16 February 2010
- Description: gamma-DL-glutamyl hydrolase
| Gene name | pgdS |
| Synonyms | ywtD |
| Essential | no |
| Product | gamma-DL-glutamyl hydrolase |
| Function | polyglutamic acid degradation |
| MW, pI | 45 kDa, 8.52 |
| Gene length, protein length | 1239 bp, 413 aa |
| Immediate neighbours | ywtE, capE |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU35860
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: nlpC/p60 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: secreted (according to Swiss-Prot), extracellular (signal peptide) PubMed
Database entries
- Structure:
- UniProt: P96740
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: pgdS PubMed
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
