Difference between revisions of "YtxO"

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(References)
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=Expression and regulation=
 
=Expression and regulation=
 +
* '''Operon:''' ''[[cotSA]]-[[cotS]]-[[ytxO]]'' {{PubMed|9603889}}
  
* '''Operon:'''
+
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190,9603889}}
 
 
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190}}
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** expressed late during sporulation in the mother cell ([[SigK]]) {{PubMed|15699190,9603889}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
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=References=
 
=References=
<pubmed> 19933362 </pubmed>
+
<pubmed> 19933362 15699190,9603889</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 21:13, 19 December 2009

  • Description: spore coat protein

Gene name ytxO
Synonyms ytbB
Essential no
Product spore coat protein
Function unknown
MW, pI 16 kDa, 4.402
Gene length, protein length 429 bp, 143 aa
Immediate neighbours ytcC, cotS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtxO context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU30890

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: outer spore coat PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Daisuke Imamura, Ritsuko Kuwana, Hiromu Takamatsu, Kazuhito Watabe
Localization of proteins to different layers and regions of Bacillus subtilis spore coats.
J Bacteriol: 2010, 192(2);518-24
[PubMed:19933362] [WorldCat.org] [DOI] (I p)

Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190] [WorldCat.org] [DOI] (P p)

H Takamatsu, Y Chikahiro, T Kodama, H Koide, S Kozuka, K Tochikubo, K Watabe
A spore coat protein, CotS, of Bacillus subtilis is synthesized under the regulation of sigmaK and GerE during development and is located in the inner coat layer of spores.
J Bacteriol: 1998, 180(11);2968-74
[PubMed:9603889] [WorldCat.org] [DOI] (P p)