Difference between revisions of "YaaK"

From SubtiWiki
Jump to: navigation, search
(Basic information/ Evolution)
Line 48: Line 48:
  
  
 +
 +
= Categories containing this gene/protein =
 +
{{SubtiWiki category|[[proteins of unknown function]]}}
 
=The protein=
 
=The protein=
  

Revision as of 20:55, 30 November 2010

  • Description: unknown

Gene name yaaK
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 11 kDa, 4.536
Gene length, protein length 321 bp, 107 aa
Immediate neighbours dnaX, recR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YaaK context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU00200

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

Categories containing this gene/protein

proteins of unknown function

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0133 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information: the mRNA is very stable (half-life > 15 min) PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

G Hambraeus, C von Wachenfeldt, L Hederstedt
Genome-wide survey of mRNA half-lives in Bacillus subtilis identifies extremely stable mRNAs.
Mol Genet Genomics: 2003, 269(5);706-14
[PubMed:12884008] [WorldCat.org] [DOI] (P p)