Difference between revisions of "YlmD"

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(Expression and regulation)
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''[[ylmD]]-[[ylmE]]-[[sepF]]-[[ylmG]]-[[ylmH]]'' (according to [http://dbtbs.hgc.jp/COG/prom/ylmDEFGH.html DBTBS])
+
* '''Operon:''' ''[[ylmD]]-[[ylmE]]-[[sepF]]-[[ylmG]]-[[ylmH]]'' {{PubMed|16420366}}
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
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=References=
 
=References=
  
<pubmed>14651647, </pubmed>
+
<pubmed>14651647, 16420366 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 18:55, 23 June 2010

  • Description: unknown

Gene name ylmD
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 30 kDa, 6.177
Gene length, protein length 834 bp, 278 aa
Immediate neighbours ylmC, ylmE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YlmD context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU15370

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0124 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed under conditions that trigger sporulation (Spo0A) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Leendert W Hamoen, Jean-Christophe Meile, Wouter de Jong, Philippe Noirot, Jeff Errington
SepF, a novel FtsZ-interacting protein required for a late step in cell division.
Mol Microbiol: 2006, 59(3);989-99
[PubMed:16420366] [WorldCat.org] [DOI] (P p)

Virginie Molle, Masaya Fujita, Shane T Jensen, Patrick Eichenberger, José E González-Pastor, Jun S Liu, Richard Losick
The Spo0A regulon of Bacillus subtilis.
Mol Microbiol: 2003, 50(5);1683-701
[PubMed:14651647] [WorldCat.org] [DOI] (P p)