Difference between revisions of "YhdL"
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| − | * '''Description:''' anti-SigM protein <br/><br/> | + | * '''Description:''' anti-[[SigM]] protein <br/><br/> |
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|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed] | |style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed] | ||
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| − | |style="background:#ABCDEF;" align="center"| '''Product''' || anti-SigM protein | + | |style="background:#ABCDEF;" align="center"| '''Product''' || anti-[[SigM]] protein |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || control of SigM activity | + | |style="background:#ABCDEF;" align="center"|'''Function''' || control of [[SigM]] activity |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 40 kDa, 6.182 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 40 kDa, 6.182 | ||
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* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' [[SigM]]-[[YhdK]]-[[YhdL]] | + | * '''Interactions:''' [[SigM]]-[[YhdK]]-[[YhdL]] {{PubMed|14993308}} |
* '''Localization:''' membrane (according to Swiss-Prot) | * '''Localization:''' membrane (according to Swiss-Prot) | ||
Revision as of 21:33, 30 October 2009
- Description: anti-SigM protein
| Gene name | yhdL |
| Synonyms | |
| Essential | yes PubMed |
| Product | anti-SigM protein |
| Function | control of SigM activity |
| MW, pI | 40 kDa, 6.182 |
| Gene length, protein length | 1074 bp, 358 aa |
| Immediate neighbours | yhdK, sigM |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU09510
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O07581
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Warawan Eiamphungporn, John D Helmann
The Bacillus subtilis sigma(M) regulon and its contribution to cell envelope stress responses.
Mol Microbiol: 2008, 67(4);830-48
[PubMed:18179421]
[WorldCat.org]
[DOI]
(P p)
Mika Yoshimura, Kei Asai, Yoshito Sadaie, Hirofumi Yoshikawa
Interaction of Bacillus subtilis extracytoplasmic function (ECF) sigma factors with the N-terminal regions of their potential anti-sigma factors.
Microbiology (Reading): 2004, 150(Pt 3);591-599
[PubMed:14993308]
[WorldCat.org]
[DOI]
(P p)
