Difference between revisions of "YitB"

From SubtiWiki
Jump to: navigation, search
Line 90: Line 90:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''[[yitB]]-[[yitA]]-[[yisZ]]''
+
* '''Operon:''' ''[[yitB]]-[[yitA]]-[[yisZ]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yitBA-yisZ.html DBTBS])
  
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190}}
+
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190,15383836}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** expressed during sporulation in the mother cell ([[SigK]]) {{PubMed|15699190,15383836}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
Line 119: Line 120:
  
 
=References=
 
=References=
 +
<pubmed> 15699190,15383836</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:58, 18 September 2009

  • Description: phospho-adenylylsulfate sulfotransferase

Gene name yitB
Synonyms
Essential no
Product phospho-adenylylsulfate sulfotransferase
Function sulfate reduction and activation
Metabolic function and regulation of this protein in SubtiPathways:
Cys, Met & Sulfate assimilation
MW, pI 27 kDa, 5.77
Gene length, protein length 708 bp, 236 aa
Immediate neighbours yitA, yitC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YitB context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU10930

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Adenosine 3',5'-bisphosphate + sulfite + thioredoxin disulfide = 3'-phosphoadenylyl sulfate + thioredoxin (according to Swiss-Prot)
  • Protein family: CysH subfamily (according to Swiss-Prot)
  • Paralogous protein(s): CysH

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the mother cell (SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190] [WorldCat.org] [DOI] (P p)

Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836] [WorldCat.org] [DOI] (I p)