Difference between revisions of "YtnM"

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=Expression and regulation=
 
=Expression and regulation=
 +
* '''Operon:''' ''[[ytmI]]-[[tcyJ]]-[[tcyK]]-[[tcyL]]-[[tcyM]]-[[tcyN]]-[[ytmO]]-[[ytnI]]-[[ytnJ]]-[[ribR]]-[[ytnL]]-[[ytnM]]'' {{PubMed|15668000}}
  
* '''Operon:''' ''[[ytmI]]-[[tcyJ]]-[[tcyK]]-[[tcyL]]-[[tcyM]]-[[tcyN]]-[[ytmO]]-[[ytnI]]-[[ytnJ]]-[[ribR]]-[[ytnL]]-[[ytnM]]''
+
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|15272571}}
 
 
* '''[[[[Sigma factor]]]]:''' [[SigA]]
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** repressed in the presence of cysteine ([[CymR]]) {{PubMed|16109943}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[CymR]]: transcription repression {{PubMed|16109943}}
 +
** [[YtlI]]: transcription activation {{PubMed|16109943}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''
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=References=
 
=References=
  
<pubmed>16109943,,16479537 </pubmed>
+
<pubmed>16109943,15668000 ,16479537 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 22:22, 18 December 2009

  • Description: unknown

Gene name ytnM
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 31 kDa, 10.15
Gene length, protein length 900 bp, 300 aa
Immediate neighbours ytoI, ytnL
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtnM context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU29280

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: Membrane (Heterogeneous) PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed in the presence of cysteine (CymR) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References