Difference between revisions of "YqxD"

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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[yqxD]]-[[dnaG]]-[[sigA]]'' {{PubMed|3298998}}
  
* '''[[[[[[Sigma factor]]]]]]:'''
+
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|3298998}}, [[SigB]]{{PubMed|10411753}}, [[SigH]] {{PubMed|3127379}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
Line 117: Line 117:
  
 
=References=
 
=References=
 
+
<pubmed>3298998 10411753 3127379</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 17:59, 22 November 2009

  • Description: unknown

Gene name yqxD
Synonyms yqfM
Essential no
Product unknown
Function unknown
MW, pI 22 kDa, 7.172
Gene length, protein length 588 bp, 196 aa
Immediate neighbours dnaG, yqfL
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YqxD context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU25230

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0178 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

C T Liao, Y D Wen, W H Wang, B Y Chang
Identification and characterization of a stress-responsive promoter in the macromolecular synthesis operon of Bacillus subtilis.
Mol Microbiol: 1999, 33(2);377-88
[PubMed:10411753] [WorldCat.org] [DOI] (P p)

H L Carter, L F Wang, R H Doi, C P Moran
rpoD operon promoter used by sigma H-RNA polymerase in Bacillus subtilis.
J Bacteriol: 1988, 170(4);1617-21
[PubMed:3127379] [WorldCat.org] [DOI] (P p)

L F Wang, R H Doi
Promoter switching during development and the termination site of the sigma 43 operon of Bacillus subtilis.
Mol Gen Genet: 1987, 207(1);114-9
[PubMed:3298998] [WorldCat.org] [DOI] (P p)