Difference between revisions of "YkvQ"

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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[ykvP]]-[[ykvQ]]'' {{PubMed|11011148}}
 
+
* '''[[Sigma factor]]:'''  
+
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|11011148,15699190}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 
+
** expressed late during sporulation in the mother cell ([[SigK]]) {{PubMed|11011148,15699190}}
* '''Regulatory mechanism:'''
 
  
 
* '''Additional information:'''  
 
* '''Additional information:'''  
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=References=
 
=References=
 
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<pubmed> 11011148,15699190</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 20:08, 3 October 2009

  • Description: similar to chitinase

Gene name ykvQ
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 26 kDa, 8.949
Gene length, protein length 696 bp, 232 aa
Immediate neighbours ykvP, ykvR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YkvQ context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU13790

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: glycosyl hydrolase 18 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190] [WorldCat.org] [DOI] (P p)

T Kodama, H Takamatsu, K Asai, N Ogasawara, Y Sadaie, K Watabe
Synthesis and characterization of the spore proteins of Bacillus subtilis YdhD, YkuD, and YkvP, which carry a motif conserved among cell wall binding proteins.
J Biochem: 2000, 128(4);655-63
[PubMed:11011148] [WorldCat.org] [DOI] (P p)