Difference between revisions of "ZnuA"

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(Expression and regulation)
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[ycdH]]-[[ycdI]]-[[yceA]]'' {{PubMed|9811636}}
  
* '''[[Sigma factor]]:'''  
+
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|12426338}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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** [[Zur]]: transcription repression in  the presence of zinc [http://www.ncbi.nlm.nih.gov/sites/entrez/12426338 PubMed]
 
** [[Zur]]: transcription repression in  the presence of zinc [http://www.ncbi.nlm.nih.gov/sites/entrez/12426338 PubMed]
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 19:39, 5 August 2009

  • Description: zinc transport in via ABC system

Gene name ycdH
Synonyms
Essential no
Product zinc transport in via ABC system (binding protein)
Function zinc uptake
Metabolic function and regulation of this protein in SubtiPathways:
Stress
MW, pI 35 kDa, 5.146
Gene length, protein length 957 bp, 319 aa
Immediate neighbours ycdG, ycdI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcdH context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU02850

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: bacterial solute-binding protein 9 family (according to Swiss-Prot)
  • Paralogous protein(s): MntA

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot), extracellular (signal peptide) PubMed, membrane PubMed

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
    • Zur: transcription repression in the presence of zinc PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References