Difference between revisions of "PdxK"
Line 18: | Line 18: | ||
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 813 bp, 271 aa | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 813 bp, 271 aa | ||
|- | |- | ||
− | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ywdC]]'', ''[[ywdA]]'' |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB13028]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB13028]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' |
Revision as of 08:16, 13 July 2009
- Description: pyridoxine, pyridoxal, and pyridoxamine kinase
Gene name | thiD |
Synonyms | ywdB, ipa-52r, pdxK |
Essential | no |
Product | pyridoxine, pyridoxal, and pyridoxamine kinase |
Function | biosynthesis of pyridoxal phosphate |
MW, pI | 28 kDa, 4.922 |
Gene length, protein length | 813 bp, 271 aa |
Immediate neighbours | ywdC, ywdA |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
The gene
Basic information
- Locus tag: BSU38020
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + 4-amino-2-methyl-5-phosphomethylpyrimidine = ADP + 4-amino-2-methyl-5-diphosphomethylpyrimidine (according to Swiss-Prot)
- Protein family: thiD family (according to Swiss-Prot)
- Paralogous protein(s): YjbV
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 2IB5
- Swiss prot entry: P39610
- KEGG entry: [3]
- E.C. number: 2.7.4.7
Additional information
- subject to Clp-dependent proteolysis upon glucose starvation PubMed
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information: subject to Clp-dependent proteolysis upon glucose starvation PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References