yfiF

168

similar to transcription factor (AraC family)

Locus: BSU_08250

Molecular weight: 36.04 kDa

Isoelectric point: 8.08

Protein length: 314 aa

Gene length: 945 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: yfiF

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG4977 (Galperin et al., 2021)

Gene

Coordinates: 898,961 → 899,905

The protein

Protein family

• AraC family

Domains

• HTH araC/xylS-type domain (aa 192-289) (according to UniProt)

Structure

• 1BL0 (PDB) (from E. coli, the HTH araC/xylS-type domain, 35% identity) PubMed
• P54722 (AlphaFold)

Expression and Regulation

Operons

• Genes: yfiF

  Description: (according to DBTBS) null

Biological materials

Mutant

• MGNA-C296 (yfiF::erm), available at the NBRP B. subtilis, Japan
• BKE08250 (ΔyfiF::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTAAACGCCTCCTAACA,  downstream forward: _UP4_TAAGATGTCCTGAAATGACA
• BKK08250 (ΔyfiF::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTAAACGCCTCCTAACA,  downstream forward: _UP4_TAAGATGTCCTGAAATGACA

References

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