yddQ

168

similar to isochorismatase

Locus: BSU_05070

Molecular weight: 19.78 kDa

Isoelectric point: 5.69

Protein length: 180 aa

Gene length: 543 bp

Function: unknown

Product: unknown

Essential: no

E.C.: PubMed

Synonyms: yddQ

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG1335 (Galperin et al., 2021)

Gene

Coordinates: 552,616 → 553,158

The protein

Protein family

• Isochorismatase family (according to UniProt)

Structure

• 3LQY (PDB) (from Oleispira antarctica, 47% identity) PubMed
• P96654 (AlphaFold)

Paralogous protein(s)

• YrdC

Biological materials

Mutant

• MGNA-C125 (yddQ::erm), available at the NBRP B. subtilis, Japan
• BKE05070 (yddQ::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTTTTTCACCTCTTAAAA,  downstream forward: _UP4_TAAAAGAATTTCCTGCGCGA
• BKK05070 (yddQ::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTTTTTCACCTCTTAAAA,  downstream forward: _UP4_TAAAAGAATTTCCTGCGCGA

References

Research papers

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