yaaK

168

similar to DNA-binding protein

Locus: BSU_00200

Molecular weight: 11.64 kDa

Isoelectric point: 4.54

Protein length: 107 aa

Gene length: 324 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: yaaK

Genomic Context

Hide small RNAsZoom:

Categories containing this gene/protein

Groups of genes, Strongly expressed understudied proteins, Other highly expressed unknown proteins

Groups of genes, Proteins of unknown function

List of homologs in different organisms, belongs to COG0718 (Galperin et al., 2021)

Gene

Coordinates: 28,529  28,852

The protein

Protein family

YbaB/EbfC family (single member, according to UniProt)

Structure

1YBX (PDB) (from Clostridium thermocellum, 53% identity)
P24281 (AlphaFold)

Localization

nucleoid (according to UniProt)

Expression and Regulation

Operons

Genes: dnaX-yaaK-recR-yaaL-bofA

Description: PubMed

Additional information

the mRNA is very stable (> 15 min) PubMed

Biological materials

Mutant

MGNA-B892 (yaaK::erm), available at the NBRP B. subtilis, Japan
BKE00200 (yaaK::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATAGCATTCACTCTCTTTC,  downstream forward: _UP4_TTATTCTAGGGGGATAAAAG
BKK00200 (yaaK::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATAGCATTCACTCTCTTTC,  downstream forward: _UP4_TTATTCTAGGGGGATAAAAG

References

Reviews

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Original Publications

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