yknV

168

similar to ABC transporter (membrane protein)

Locus: BSU_14330

Molecular weight: 67.75 kDa

Isoelectric point: 6.69

Protein length: 604 aa

Gene length: 1815 bp

Function: unknown

Product: ABC transporter (membrane protein)

Essential: no

Synonyms: yknV

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG1132 (Galperin et al., 2021)

Gene

Coordinates: 1,501,658 → 1,503,472

The protein

Protein family

• ABC transporter superfamily (according to UniProt)

Domains

• has both a membrane-spanning and an ATP-binding domain PubMed
• ABC transmembrane type-1 domain (aa 45-329) (according to UniProt)
• ABC transporter domain (aa 363-597) (according to UniProt)

Structure

• 5MKK (PDB) (TmrAB complex from Thermus thermophilus, 35% identity) PubMed
• O31708 (AlphaFold)

Paralogous protein(s)

• YwjA, YfiC, BmrA, YknU, BmrC, YfiB, YgaD

Localization

• cell membrane PubMed

Expression and Regulation

Operons

• Genes: yknU-yknV-yknW-yknX-yknY-yknZ

  Description: PubMed

Biological materials

Mutant

• MGNA-B347 (yknV::erm), available at the NBRP B. subtilis, Japan
• BKE14330 (ΔyknV::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CGCTTGTTTCATTTGGCCCC,  downstream forward: _UP4_TAATATGAAAAGCCTTCAAT
• BKK14330 (ΔyknV::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CGCTTGTTTCATTTGGCCCC,  downstream forward: _UP4_TAATATGAAAAGCCTTCAAT

References

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