yxaD

168

similar to transcriptional regulator ([wiki|MarR family])

locus: BSU_40010

Molecular weight: 16.70 kDa

pI: 6.76

Protein length: 143 aa

Gene length: 432 bp

function: unknown

product: unknown

essential: no

synonyms: yxaD

List of homologs in different organisms, belongs to COG1846 (Galperin et al., 2021)

Gene

Coordinates: 4,109,185  4,109,616

Phenotypes of a mutant

• the mutant tends to acquire suppressor mutations that result in improved growth [Pubmed|28189581]

The protein

Protein family

• [wiki|MarR family]

[wiki|Domains]

• [wiki|HTH marR-type domain] (aa 11-139) (according to UniProt)

Structure

• [AF|P42103]

Expression and Regulation

Operons

• genes: [gene|30E52226538965F2AF1EC34F5E4A14CA8B4CDE26|yxaD]

  description: [Pubmed|10746760]

Biological materials

Mutant

• MGNA-B761 (yxaD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1760 NBRP B. subtilis, Japan]
• BKE40010 ([gene|30E52226538965F2AF1EC34F5E4A14CA8B4CDE26|yxaD]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE40010 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CAATCGCTCTCGCTCCCTAT,  downstream forward: _UP4_TAACAGCTGAAAAACCCATG
• BKK40010 ([gene|30E52226538965F2AF1EC34F5E4A14CA8B4CDE26|yxaD]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK40010 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CAATCGCTCTCGCTCCCTAT,  downstream forward: _UP4_TAACAGCTGAAAAACCCATG

References

• 16479537,10746760