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| Line 1: |
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| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeDdarmwindeedarmwindesdarmwindecdarmwinderdarmwindeidarmwindepdarmwindetdarmwindeidarmwindeodarmwindendarmwinde:darmwinde'darmwinde'darmwinde'darmwinde darmwindetdarmwindeRdarmwindeNdarmwindeAdarmwinde-darmwindeIdarmwindeldarmwindeedarmwinde
| + | * '''Description:''' glutamine-fructose-6-phosphate transaminase <br/><br/> |
| − | darmwinde
| + | |
| − | darmwinde
| + | {| align="right" border="1" cellpadding="2" |
| − | darmwinde
| + | |- |
| − | darmwinde{darmwinde|darmwinde darmwindeadarmwindeldarmwindeidarmwindegdarmwindendarmwinde=darmwinde"darmwinderdarmwindeidarmwindegdarmwindehdarmwindetdarmwinde"darmwinde darmwindebdarmwindeodarmwinderdarmwindeddarmwindeedarmwinderdarmwinde=darmwinde"darmwinde1darmwinde"darmwinde darmwindecdarmwindeedarmwindeldarmwindeldarmwindepdarmwindeadarmwindeddarmwindeddarmwindeidarmwindendarmwindegdarmwinde=darmwinde"darmwinde2darmwinde"darmwinde darmwinde
| + | |style="background:#ABCDEF;" align="center"|'''Gene name''' glaube ich oder nicht |
| − | darmwinde
| + | |''glmS'' |
| − | darmwinde|darmwinde-darmwinde
| + | |- |
| − | darmwinde
| + | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''gcaA, ybxD '' |
| − | darmwinde|darmwindesdarmwindetdarmwindeydarmwindeldarmwindeedarmwinde=darmwinde"darmwindebdarmwindeadarmwindecdarmwindekdarmwindegdarmwinderdarmwindeodarmwindeudarmwindendarmwindeddarmwinde:darmwinde#darmwindeAdarmwindeBdarmwindeCdarmwindeDdarmwindeEdarmwindeFdarmwinde;darmwinde"darmwinde darmwindeadarmwindeldarmwindeidarmwindegdarmwindendarmwinde=darmwinde"darmwindecdarmwindeedarmwindendarmwindetdarmwindeedarmwinderdarmwinde"darmwinde|darmwinde'darmwinde'darmwinde'darmwindeGdarmwindeedarmwindendarmwindeedarmwinde darmwindendarmwindeadarmwindemdarmwindeedarmwinde'darmwinde'darmwinde'darmwinde
| + | |- |
| − | darmwinde
| + | |style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed] |
| − | darmwinde|darmwinde'darmwinde'darmwindetdarmwinderdarmwindendarmwindeOdarmwinde-darmwindeIdarmwindeldarmwindeedarmwinde'darmwinde'darmwinde
| + | |- |
| − | darmwinde
| + | |style="background:#ABCDEF;" align="center"| '''Product''' || glutamine-fructose-6-phosphate transaminase |
| − | darmwinde|darmwinde-darmwinde
| + | |- |
| − | darmwinde
| + | |style="background:#ABCDEF;" align="center"|'''Function''' || cell wall synthesis |
| − | darmwinde|darmwindesdarmwindetdarmwindeydarmwindeldarmwindeedarmwinde=darmwinde"darmwindebdarmwindeadarmwindecdarmwindekdarmwindegdarmwinderdarmwindeodarmwindeudarmwindendarmwindeddarmwinde:darmwinde#darmwindeAdarmwindeBdarmwindeCdarmwindeDdarmwindeEdarmwindeFdarmwinde;darmwinde"darmwinde darmwindeadarmwindeldarmwindeidarmwindegdarmwindendarmwinde=darmwinde"darmwindecdarmwindeedarmwindendarmwindetdarmwindeedarmwinderdarmwinde"darmwinde|darmwinde darmwinde'darmwinde'darmwinde'darmwindeSdarmwindeydarmwindendarmwindeodarmwindendarmwindeydarmwindemdarmwindesdarmwinde'darmwinde'darmwinde'darmwinde darmwinde|darmwinde|darmwinde darmwinde'darmwinde'darmwinde darmwinde'darmwinde'darmwinde
| + | |- |
| − | darmwinde
| + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=sandbox sandbox]''' |
| − | darmwinde|darmwinde-darmwinde
| + | |- |
| − | darmwinde
| + | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 65 kDa, 4.796 |
| − | darmwinde|darmwindesdarmwindetdarmwindeydarmwindeldarmwindeedarmwinde=darmwinde"darmwindebdarmwindeadarmwindecdarmwindekdarmwindegdarmwinderdarmwindeodarmwindeudarmwindendarmwindeddarmwinde:darmwinde#darmwindeAdarmwindeBdarmwindeCdarmwindeDdarmwindeEdarmwindeFdarmwinde;darmwinde"darmwinde darmwindeadarmwindeldarmwindeidarmwindegdarmwindendarmwinde=darmwinde"darmwindecdarmwindeedarmwindendarmwindetdarmwindeedarmwinderdarmwinde"darmwinde|darmwinde darmwinde'darmwinde'darmwinde'darmwindeEdarmwindesdarmwindesdarmwindeedarmwindendarmwindetdarmwindeidarmwindeadarmwindeldarmwinde'darmwinde'darmwinde'darmwinde darmwinde|darmwinde|darmwinde darmwindendarmwindeodarmwinde darmwinde
| + | |- |
| − | darmwinde
| + | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1800 bp, 600 aa |
| − | darmwinde|darmwinde-darmwinde
| + | |- |
| − | darmwinde
| + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[glmM]]'', ''[[ybbU]]'' |
| − | darmwinde|darmwindesdarmwindetdarmwindeydarmwindeldarmwindeedarmwinde=darmwinde"darmwindebdarmwindeadarmwindecdarmwindekdarmwindegdarmwinderdarmwindeodarmwindeudarmwindendarmwindeddarmwinde:darmwinde#darmwindeAdarmwindeBdarmwindeCdarmwindeDdarmwindeEdarmwindeFdarmwinde;darmwinde"darmwinde darmwindeadarmwindeldarmwindeidarmwindegdarmwindendarmwinde=darmwinde"darmwindecdarmwindeedarmwindendarmwindetdarmwindeedarmwinderdarmwinde"darmwinde|darmwinde darmwinde'darmwinde'darmwinde'darmwindePdarmwinderdarmwindeodarmwindeddarmwindeudarmwindecdarmwindetdarmwinde'darmwinde'darmwinde'darmwinde darmwinde|darmwinde|darmwinde darmwindetdarmwinderdarmwindeadarmwindendarmwindesdarmwindefdarmwindeedarmwinderdarmwinde darmwindeRdarmwindeNdarmwindeAdarmwinde-darmwindeIdarmwindeldarmwindeedarmwinde
| + | |- |
| − | darmwinde
| + | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB11954]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' |
| − | darmwinde|darmwinde-darmwinde
| + | |- |
| − | darmwinde
| + | |colspan="2" | '''Genetic context''' <br/> [[Image:quintos.gif]] |
| − | darmwinde|darmwindesdarmwindetdarmwindeydarmwindeldarmwindeedarmwinde=darmwinde"darmwindebdarmwindeadarmwindecdarmwindekdarmwindegdarmwinderdarmwindeodarmwindeudarmwindendarmwindeddarmwinde:darmwinde#darmwindeAdarmwindeBdarmwindeCdarmwindeDdarmwindeEdarmwindeFdarmwinde;darmwinde"darmwinde darmwindeadarmwindeldarmwindeidarmwindegdarmwindendarmwinde=darmwinde"darmwindecdarmwindeedarmwindendarmwindetdarmwindeedarmwinderdarmwinde"darmwinde|darmwinde'darmwinde'darmwinde'darmwinde|darmwinde|darmwinde darmwindetdarmwinderdarmwindeadarmwindendarmwindesdarmwindeldarmwindeadarmwindetdarmwindeidarmwindeodarmwindendarmwinde darmwinde
| + | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> |
| − | darmwinde
| + | |- |
| − | darmwinde|darmwinde-darmwinde
| + | |- |
| − | darmwinde
| + | |colspan="2" | '''Genetic context''' <br/> [[Image:test.gif]] |
| − | darmwinde darmwinde darmwinde
| + | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> |
| − | darmwinde
| + | |- |
| − | darmwinde|darmwindesdarmwindetdarmwindeydarmwindeldarmwindeedarmwinde=darmwinde"darmwindebdarmwindeadarmwindecdarmwindekdarmwindegdarmwinderdarmwindeodarmwindeudarmwindendarmwindeddarmwinde:darmwinde#darmwindeAdarmwindeBdarmwindeCdarmwindeDdarmwindeEdarmwindeFdarmwinde;darmwinde"darmwinde darmwindeadarmwindeldarmwindeidarmwindegdarmwindendarmwinde=darmwinde"darmwindecdarmwindeedarmwindendarmwindetdarmwindeedarmwinderdarmwinde"darmwinde|darmwinde'darmwinde'darmwinde'darmwindeIdarmwindemdarmwindemdarmwindeedarmwindeddarmwindeidarmwindeadarmwindetdarmwindeedarmwinde darmwindendarmwindeedarmwindeidarmwindegdarmwindehdarmwindebdarmwindeodarmwindeudarmwinderdarmwindesdarmwinde'darmwinde'darmwinde'darmwinde darmwinde|darmwinde|darmwinde darmwinde'darmwinde'darmwinde[darmwinde[darmwinderdarmwinderdarmwindendarmwindeOdarmwinde-darmwinde1darmwinde6darmwindeSdarmwinde]darmwinde]darmwinde'darmwinde'darmwinde,darmwinde darmwinde'darmwinde'darmwinde[darmwinde[darmwindetdarmwinderdarmwindendarmwindeOdarmwinde-darmwindeAdarmwindeldarmwindeadarmwinde]darmwinde]darmwinde'darmwinde'darmwinde
| + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=glmS_200277_202079_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:glmS_expression.png|500px]] |
| − | darmwinde
| + | |- |
| − | darmwinde|darmwinde-darmwinde
| + | |} |
| − | darmwinde
| + | |
| − | darmwinde|darmwindesdarmwindetdarmwindeydarmwindeldarmwindeedarmwinde=darmwinde"darmwindebdarmwindeadarmwindecdarmwindekdarmwindegdarmwinderdarmwindeodarmwindeudarmwindendarmwindeddarmwinde:darmwinde#darmwindeFdarmwindeAdarmwindeFdarmwinde8darmwindeCdarmwindeCdarmwinde;darmwinde"darmwinde darmwindeadarmwindeldarmwindeidarmwindegdarmwindendarmwinde=darmwinde"darmwindecdarmwindeedarmwindendarmwindetdarmwindeedarmwinderdarmwinde"darmwinde|darmwinde'darmwinde'darmwinde'darmwinde[darmwindehdarmwindetdarmwindetdarmwindepdarmwinde:darmwinde/darmwinde/darmwindesdarmwindeudarmwindebdarmwindetdarmwindeidarmwindewdarmwindeidarmwindekdarmwindeidarmwinde.darmwindeudarmwindendarmwindeidarmwinde-darmwindegdarmwindeodarmwindeedarmwindetdarmwindetdarmwindeidarmwindendarmwindegdarmwindeedarmwindendarmwinde.darmwindeddarmwindeedarmwinde/darmwindetdarmwinderdarmwindendarmwindeOdarmwinde-darmwindeIdarmwindeldarmwindeedarmwinde_darmwindendarmwindeudarmwindecdarmwindeldarmwindeedarmwindeodarmwindetdarmwindeidarmwindeddarmwindeedarmwinde.darmwindetdarmwindexdarmwindetdarmwinde darmwinde darmwinde darmwinde darmwinde darmwindeGdarmwindeedarmwindendarmwindeedarmwinde darmwindesdarmwindeedarmwindeqdarmwindeudarmwindeedarmwindendarmwindecdarmwindeedarmwinde darmwinde darmwinde darmwinde darmwinde darmwinde darmwinde(darmwinde+darmwinde2darmwinde0darmwinde0darmwindebdarmwindepdarmwinde)darmwinde darmwinde darmwinde darmwinde]darmwinde'darmwinde'darmwinde'darmwinde darmwinde
| + | __TOC__ |
| − | darmwinde
| + | <br/><br/><br/><br/> |
| − | darmwinde|darmwindesdarmwindetdarmwindeydarmwindeldarmwindeedarmwinde=darmwinde"darmwindebdarmwindeadarmwindecdarmwindekdarmwindegdarmwinderdarmwindeodarmwindeudarmwindendarmwindeddarmwinde:darmwinde#darmwindeFdarmwindeAdarmwindeFdarmwinde8darmwindeCdarmwindeCdarmwinde;darmwinde"darmwinde darmwindeadarmwindeldarmwindeidarmwindegdarmwindendarmwinde=darmwinde"darmwindecdarmwindeedarmwindendarmwindetdarmwindeedarmwinderdarmwinde"darmwinde|darmwinde'darmwinde'darmwinde'darmwinde darmwinde darmwinde'darmwinde'darmwinde'darmwinde
| + | <br/><br/><br/><br/> |
| − | darmwinde
| + | <br/><br/><br/><br/> |
| − | darmwinde|darmwinde-darmwinde
| + | <br/><br/><br/><br/> |
| − | darmwinde
| + | <br/><br/><br/><br/> |
| − | darmwinde|darmwindecdarmwindeodarmwindeldarmwindesdarmwindepdarmwindeadarmwindendarmwinde=darmwinde"darmwinde2darmwinde"darmwinde darmwinde|darmwinde darmwinde'darmwinde'darmwinde'darmwindeGdarmwindeedarmwindendarmwindeedarmwindetdarmwindeidarmwindecdarmwinde darmwindecdarmwindeodarmwindendarmwindetdarmwindeedarmwindexdarmwindetdarmwinde'darmwinde'darmwinde'darmwinde darmwinde<darmwindebdarmwinderdarmwinde/darmwinde>darmwinde darmwinde[darmwinde[darmwindeIdarmwindemdarmwindeadarmwindegdarmwindeedarmwinde:darmwindetdarmwinderdarmwindendarmwindeOdarmwinde-darmwindeIdarmwindeldarmwindeedarmwinde_darmwindecdarmwindeodarmwindendarmwindetdarmwindeedarmwindexdarmwindetdarmwinde.darmwindegdarmwindeidarmwindefdarmwinde]darmwinde]darmwinde
| + | |
| − | darmwinde
| + | |
| − | darmwinde|darmwinde-darmwinde
| + | <br/><br/> |
| − | darmwinde
| + | |
| − | darmwinde|darmwinde}darmwinde
| + | = [[Categories]] containing this gene/protein = |
| − | darmwinde
| + | {{SubtiWiki category|[[cell wall synthesis]]}}, |
| − | darmwinde
| + | {{SubtiWiki category|[[biosynthesis of cell wall components]]}}, |
| − | darmwinde
| + | {{SubtiWiki category|[[essential genes]]}} |
| − | darmwinde_darmwinde_darmwindeTdarmwindeOdarmwindeCdarmwinde_darmwinde_darmwinde
| + | |
| − | darmwinde
| + | = This gene is a member of the following [[regulons]] = |
| − | darmwinde
| + | {{SubtiWiki regulon|[[glmS ribozyme]]}} |
| − | darmwinde
| + | |
| − | darmwinde<darmwindebdarmwinderdarmwinde/darmwinde>darmwinde<darmwindebdarmwinderdarmwinde/darmwinde>darmwinde
| + | =The gene= |
| − | darmwinde
| + | |
| − | darmwinde
| + | === Basic information === |
| − | darmwinde
| + | |
| − | darmwinde=darmwindeTdarmwindehdarmwindeedarmwinde darmwindegdarmwindeedarmwindendarmwindeedarmwinde=darmwinde
| + | * '''Locus tag:''' BSU01780 |
| − | darmwinde
| + | |
| − | darmwinde
| + | ===Phenotypes of a mutant === |
| − | darmwinde
| + | |
| − | darmwinde=darmwinde=darmwinde=darmwinde darmwindeBdarmwindeadarmwindesdarmwindeidarmwindecdarmwinde darmwindeidarmwindendarmwindefdarmwindeodarmwinderdarmwindemdarmwindeadarmwindetdarmwindeidarmwindeodarmwindendarmwinde darmwinde=darmwinde=darmwinde=darmwinde
| + | essential [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed] |
| − | darmwinde
| + | |
| − | darmwinde
| + | === Database entries === |
| − | darmwinde
| + | * '''BsubCyc:''' [HELLO BSU00100] |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeCdarmwindeodarmwindeodarmwinderdarmwindeddarmwindeidarmwindendarmwindeadarmwindetdarmwindeedarmwindesdarmwinde:darmwinde'darmwinde'darmwinde'darmwinde
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU00240&redirect=T"] |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''DBTBS entry:''' no entry |
| − | darmwinde
| + | |
| − | darmwinde=darmwinde=darmwinde=darmwindePdarmwindehdarmwindeedarmwindendarmwindeodarmwindetdarmwindeydarmwindepdarmwindeedarmwindesdarmwinde darmwindeodarmwindefdarmwinde darmwindeadarmwinde darmwindemdarmwindeudarmwindetdarmwindeadarmwindendarmwindetdarmwinde darmwinde=darmwinde=darmwinde=darmwinde
| + | * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10948] |
| − | darmwinde
| + | |
| − | darmwinde
| + | === Additional information=== |
| − | darmwinde
| + | |
| − | darmwinde=darmwinde=darmwinde=darmwinde darmwindeDdarmwindeadarmwindetdarmwindeadarmwindebdarmwindeadarmwindesdarmwindeedarmwinde darmwindeedarmwindendarmwindetdarmwinderdarmwindeidarmwindeedarmwindesdarmwinde darmwinde=darmwinde=darmwinde=darmwinde
| + | =The protein= |
| − | darmwinde
| + | |
| − | darmwinde
| + | === Basic information/ Evolution === |
| − | darmwinde
| + | |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeDdarmwindeBdarmwindeTdarmwindeBdarmwindeSdarmwinde darmwindeedarmwindendarmwindetdarmwinderdarmwindeydarmwinde:darmwinde'darmwinde'darmwinde'darmwinde darmwinde[darmwindehdarmwindetdarmwindetdarmwindepdarmwinde:darmwinde/darmwinde/darmwindeddarmwindebdarmwindetdarmwindebdarmwindesdarmwinde.darmwindehdarmwindegdarmwindecdarmwinde.darmwindejdarmwindepdarmwinde/darmwindeCdarmwindeOdarmwindeGdarmwinde/darmwindepdarmwinderdarmwindeodarmwindemdarmwinde/darmwinderdarmwinderdarmwindendarmwindeOdarmwinde-darmwinde1darmwinde6darmwindeSdarmwinde-darmwindetdarmwinderdarmwindendarmwindeOdarmwinde-darmwindeIdarmwindeldarmwindeedarmwinde-darmwindetdarmwinderdarmwindendarmwindeOdarmwinde-darmwindeAdarmwindeldarmwindeadarmwinde-darmwinderdarmwinderdarmwindendarmwindeOdarmwinde-darmwinde2darmwinde3darmwindeSdarmwinde-darmwinderdarmwinderdarmwindendarmwindeOdarmwinde-darmwinde5darmwindeSdarmwinde.darmwindehdarmwindetdarmwindemdarmwindeldarmwinde]darmwinde
| + | * '''Catalyzed reaction/ biological activity:''' L-glutamine + D-fructose 6-phosphate = L-glutamate + D-glucosamine 6-phosphate (according to Swiss-Prot) |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''Protein family:''' |
| − | darmwinde
| + | |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeSdarmwindeudarmwindebdarmwindetdarmwindeidarmwindeLdarmwindeidarmwindesdarmwindetdarmwinde darmwindeedarmwindendarmwindetdarmwinderdarmwindeydarmwinde:darmwinde'darmwinde'darmwinde'darmwinde darmwinde[darmwindehdarmwindetdarmwindetdarmwindepdarmwinde:darmwinde/darmwinde/darmwindegdarmwindeedarmwindendarmwindeodarmwindeldarmwindeidarmwindesdarmwindetdarmwinde.darmwindepdarmwindeadarmwindesdarmwindetdarmwindeedarmwindeudarmwinderdarmwinde.darmwindefdarmwinderdarmwinde/darmwindeSdarmwindeudarmwindebdarmwindetdarmwindeidarmwindeLdarmwindeidarmwindesdarmwindetdarmwinde/darmwindegdarmwindeedarmwindendarmwindeodarmwindemdarmwindeedarmwinde.darmwindecdarmwindegdarmwindeidarmwinde?darmwindegdarmwindeedarmwindendarmwindeedarmwinde_darmwindeddarmwindeedarmwindetdarmwindeadarmwindeidarmwindeldarmwinde+darmwindeBdarmwindeGdarmwinde0darmwinde0darmwinde0darmwinde0darmwinde6darmwinde]darmwinde
| + | * '''Paralogous protein(s):''' |
| − | darmwinde
| + | |
| − | darmwinde
| + | === Extended information on the protein === |
| − | darmwinde
| + | |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeSdarmwindetdarmwinderdarmwindeudarmwindecdarmwindetdarmwindeudarmwinderdarmwindeedarmwinde:darmwinde'darmwinde'darmwinde'darmwinde
| + | * '''Kinetic information:''' |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''Domains:''' |
| − | darmwinde
| + | |
| − | darmwinde=darmwinde=darmwinde=darmwinde darmwindeAdarmwindeddarmwindeddarmwindeidarmwindetdarmwindeidarmwindeodarmwindendarmwindeadarmwindeldarmwinde darmwindeidarmwindendarmwindefdarmwindeodarmwinderdarmwindemdarmwindeadarmwindetdarmwindeidarmwindeodarmwindendarmwinde=darmwinde=darmwinde=darmwinde
| + | * '''Modification:''' |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''Cofactor(s):''' |
| − | darmwinde
| + | |
| − | darmwinde=darmwindeEdarmwindexdarmwindepdarmwinderdarmwindeedarmwindesdarmwindesdarmwindeidarmwindeodarmwindendarmwinde darmwindeadarmwindendarmwindeddarmwinde darmwinderdarmwindeedarmwindegdarmwindeudarmwindeldarmwindeadarmwindetdarmwindeidarmwindeodarmwindendarmwinde=darmwinde
| + | * '''Effectors of protein activity:''' |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''[[SubtInteract|Interactions]]:''' |
| − | darmwinde
| + | |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeOdarmwindepdarmwindeedarmwinderdarmwindeodarmwindendarmwinde:darmwinde'darmwinde'darmwinde'darmwinde darmwinde'darmwinde'darmwinderdarmwinderdarmwindendarmwindeOdarmwinde'darmwinde'darmwinde darmwindeodarmwindepdarmwindeedarmwinderdarmwindeodarmwindendarmwinde darmwinde(darmwinde'darmwinde'darmwinde[darmwinde[darmwinderdarmwinderdarmwindendarmwindeOdarmwinde-darmwinde1darmwinde6darmwindeSdarmwinde]darmwinde]darmwinde darmwinde-darmwinde darmwinde[darmwinde[darmwindetdarmwinderdarmwindendarmwindeOdarmwinde-darmwindeIdarmwindeldarmwindeedarmwinde]darmwinde]darmwinde darmwinde-darmwinde darmwinde[darmwinde[darmwindetdarmwinderdarmwindendarmwindeOdarmwinde-darmwindeAdarmwindeldarmwindeadarmwinde]darmwinde]darmwinde darmwinde-darmwinde[darmwinde[darmwinderdarmwinderdarmwindendarmwindeOdarmwinde-darmwinde2darmwinde3darmwindeSdarmwinde]darmwinde]darmwinde darmwinde-darmwinde darmwinde[darmwinde[darmwinderdarmwinderdarmwindendarmwindeOdarmwinde-darmwinde5darmwindeSdarmwinde]darmwinde]darmwinde'darmwinde'darmwinde)darmwinde darmwinde[darmwindehdarmwindetdarmwindetdarmwindepdarmwinde:darmwinde/darmwinde/darmwindewdarmwindewdarmwindewdarmwinde.darmwindendarmwindecdarmwindebdarmwindeidarmwinde.darmwindendarmwindeldarmwindemdarmwinde.darmwindendarmwindeidarmwindehdarmwinde.darmwindegdarmwindeodarmwindevdarmwinde/darmwindesdarmwindeidarmwindetdarmwindeedarmwindesdarmwinde/darmwindeedarmwindendarmwindetdarmwinderdarmwindeedarmwindezdarmwinde/darmwinde6darmwinde3darmwinde1darmwinde2darmwinde4darmwinde1darmwinde8darmwinde darmwindePdarmwindeudarmwindebdarmwindeMdarmwindeedarmwindeddarmwinde]darmwinde
| + | * '''[[Localization]]:''' |
| − | darmwinde
| + | ** cytoplasm (according to Swiss-Prot) |
| − | darmwinde
| + | |
| − | darmwinde
| + | === Database entries === |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeSdarmwindeidarmwindegdarmwindemdarmwindeadarmwinde darmwindefdarmwindeadarmwindecdarmwindetdarmwindeodarmwinderdarmwinde:darmwinde'darmwinde'darmwinde'darmwinde darmwindeSdarmwindeidarmwindegdarmwindeAdarmwinde darmwinde[darmwindehdarmwindetdarmwindetdarmwindepdarmwinde:darmwinde/darmwinde/darmwindewdarmwindewdarmwindewdarmwinde.darmwindendarmwindecdarmwindebdarmwindeidarmwinde.darmwindendarmwindeldarmwindemdarmwinde.darmwindendarmwindeidarmwindehdarmwinde.darmwindegdarmwindeodarmwindevdarmwinde/darmwindesdarmwindeidarmwindetdarmwindeedarmwindesdarmwinde/darmwindeedarmwindendarmwindetdarmwinderdarmwindeedarmwindezdarmwinde/darmwinde6darmwinde3darmwinde1darmwinde2darmwinde4darmwinde1darmwinde8darmwinde darmwindePdarmwindeudarmwindebdarmwindeMdarmwindeedarmwindeddarmwinde]darmwinde
| + | * '''BsubCyc:''' [HELLO BSU00100] |
| − | darmwinde
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU00240&redirect=T BSU00240] |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''Structure:''' |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeRdarmwindeedarmwindegdarmwindeudarmwindeldarmwindeadarmwindetdarmwindeidarmwindeodarmwindendarmwinde:darmwinde'darmwinde'darmwinde'darmwinde darmwinde
| + | **[http://www.pdb.org/pdb/explore/explore.do?structureId=HIV2 HIV2] (from ''Bacillus subtilis'', 100% identity) {{PubMed|13454352}} |
| − | darmwinde
| + | ** [http://www.pdb.org/pdb/explore/explore.do?structureId=2VF4 2VF4] (GlmS from ''E. coli'', 39% identity, 58% similarity) {{PubMed|18295797}} |
| − | darmwinde
| + | ** the ribozyme: [http://www.rcsb.org/pdb/explore.do?structureId=3g8s 3G8S], [http://www.rcsb.org/pdb/explore.do?structureId=3G9C 3G9C], [http://www.rcsb.org/pdb/explore.do?structureId=3g8t 3G8T], [http://www.rcsb.org/pdb/explore.do?structureId=3g95 3G95], [http://www.rcsb.org/pdb/explore.do?structureId=3g96 3G96] (all for the ribozyme from ''Bacillus anthracis''), [http://www.rcsb.org/pdb/explore.do?structureId=2HO7 2HO7] (the ribozyme from ''Thermonanaerobacter tengcongensis'') |
| − | darmwinde
| + | |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeRdarmwindeedarmwindegdarmwindeudarmwindeldarmwindeadarmwindetdarmwindeodarmwinderdarmwindeydarmwinde darmwindemdarmwindeedarmwindecdarmwindehdarmwindeadarmwindendarmwindeidarmwindesdarmwindemdarmwinde:darmwinde'darmwinde'darmwinde'darmwinde darmwinde
| + | * '''UniProt:''' [http://www.uniprot.org/uniprot/P39754 P39754] |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU01780] |
| − | darmwinde
| + | |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeAdarmwindeddarmwindeddarmwindeidarmwindetdarmwindeidarmwindeodarmwindendarmwindeadarmwindeldarmwinde darmwindeidarmwindendarmwindefdarmwindeodarmwinderdarmwindemdarmwindeadarmwindetdarmwindeidarmwindeodarmwindendarmwinde:darmwinde'darmwinde'darmwinde'darmwinde
| + | * '''E.C. number:''' [http://www.expasy.org/enzyme/2.6.1.16 2.6.1.16] |
| − | darmwinde
| + | |
| − | darmwinde
| + | === Additional information=== |
| − | darmwinde
| + | |
| − | darmwinde=darmwindeBdarmwindeidarmwindeodarmwindeldarmwindeodarmwindegdarmwindeidarmwindecdarmwindeadarmwindeldarmwinde darmwindemdarmwindeadarmwindetdarmwindeedarmwinderdarmwindeidarmwindeadarmwindeldarmwindesdarmwinde darmwinde=darmwinde
| + | :* subject to Clp-dependent proteolysis upon glucose starvation [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Abstract&list_uids=+17981983 PubMed] |
| − | darmwinde
| + | =Expression and regulation= |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''Operon:''' ''[[ybbP]]-[[ybbR]]-[[glmM]]-[[glmS]]'' |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeMdarmwindeudarmwindetdarmwindeadarmwindendarmwindetdarmwinde:darmwinde'darmwinde'darmwinde'darmwinde
| + | |
| − | darmwinde
| + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=glmS_200277_202079_1 glmS] {{PubMed|22383849}} |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''Sigma factor:''' [[SigA]] {{PubMed|22211522}} |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeEdarmwindexdarmwindepdarmwinderdarmwindeedarmwindesdarmwindesdarmwindeidarmwindeodarmwindendarmwinde darmwindevdarmwindeedarmwindecdarmwindetdarmwindeodarmwinderdarmwinde:darmwinde'darmwinde'darmwinde'darmwinde
| + | |
| − | darmwinde
| + | * '''Regulation:''' |
| − | darmwinde darmwinde darmwinde darmwinde darmwinde darmwinde darmwinde darmwinde darmwinde
| + | ** repressed by glucosamine, N-acetylglucosamine, N-propionylglucosamine or N-formylglucosamine {{PubMed|14343123}} |
| − | darmwinde
| + | ** ''glmS'' is only expressed in the absence of glucosamine 6-phosphate ([[glmS]] [[ribozyme]]) |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeldarmwindeadarmwindecdarmwindeZdarmwinde darmwindefdarmwindeudarmwindesdarmwindeidarmwindeodarmwindendarmwinde:darmwinde'darmwinde'darmwinde'darmwinde
| + | |
| − | darmwinde
| + | * '''Regulatory mechanism:''' ''glmS'' [[ribozyme]]: glucosamine 6-phosphate binds the leader mRNA, and a [[riboswitch]] with [[ribozyme]] activity cleaves off the ''[[glmS]]'' section from the mRNA, resulting in stopp of transcript elongation |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''Additional information:''' |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeGdarmwindeFdarmwindePdarmwinde darmwindefdarmwindeudarmwindesdarmwindeidarmwindeodarmwindendarmwinde:darmwinde'darmwinde'darmwinde'darmwinde
| + | ** subject to Clp-dependent proteolysis upon glucose starvation [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Abstract&list_uids=+17981983 PubMed] |
| − | darmwinde
| + | ** A [[ncRNA]] is predicted between ''[[glmM]]'' and ''[[glmS]]'' {{PubMed|20525796}} |
| − | darmwinde
| + | ** number of protein molecules per cell (minimal medium with glucose and ammonium): 2000 {{PubMed|24696501}} |
| − | darmwinde
| + | ** number of protein molecules per cell (complex medium with amino acids, without glucose): 4000 {{PubMed|24696501}} |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindetdarmwindewdarmwindeodarmwinde-darmwindehdarmwindeydarmwindebdarmwinderdarmwindeidarmwindeddarmwinde darmwindesdarmwindeydarmwindesdarmwindetdarmwindeedarmwindemdarmwinde:darmwinde'darmwinde'darmwinde'darmwinde darmwinde
| + | |
| − | darmwinde
| + | =Biological materials = |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''Mutant:''' |
| − | darmwinde*darmwinde darmwinde'darmwinde'darmwinde'darmwindeAdarmwindendarmwindetdarmwindeidarmwindebdarmwindeodarmwindeddarmwindeydarmwinde:darmwinde'darmwinde'darmwinde'darmwinde
| + | |
| − | darmwinde
| + | * '''Expression vector:''' |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''lacZ fusion:''' |
| − | darmwinde=darmwindeLdarmwindeadarmwindebdarmwindesdarmwinde darmwindewdarmwindeodarmwinderdarmwindekdarmwindeidarmwindendarmwindegdarmwinde darmwindeodarmwindendarmwinde darmwindetdarmwindehdarmwindeidarmwindesdarmwinde darmwindegdarmwindeedarmwindendarmwindeedarmwinde/darmwindepdarmwinderdarmwindeodarmwindetdarmwindeedarmwindeidarmwindendarmwinde=darmwinde
| + | |
| − | darmwinde
| + | * '''GFP fusion:''' |
| − | darmwinde
| + | |
| − | darmwinde
| + | * '''two-hybrid system:''' |
| − | darmwinde=darmwindeYdarmwindeodarmwindeudarmwinderdarmwinde darmwindeadarmwindeddarmwindeddarmwindeidarmwindetdarmwindeidarmwindeodarmwindendarmwindeadarmwindeldarmwinde darmwinderdarmwindeedarmwindemdarmwindeadarmwinderdarmwindekdarmwindesdarmwinde=darmwinde
| + | |
| − | darmwinde
| + | * '''Antibody:''' |
| − | darmwinde
| + | |
| − | darmwinde
| + | =Labs working on this gene/protein= |
| − | darmwinde=darmwindeRdarmwindeedarmwindefdarmwindeedarmwinderdarmwindeedarmwindendarmwindecdarmwindeedarmwindesdarmwinde=darmwinde
| + | |
| − | darmwinde
| + | [[Wade Winkler]], University of Texas, USA, [http://www.utsouthwestern.edu/findfac/professional/0,,68018,00.html Homepage] |
| − | darmwinde
| + | |
| − | darmwinde
| + | =Your additional remarks= |
| − | darmwinde#darmwinde darmwindeOdarmwindegdarmwindeadarmwindesdarmwindeadarmwindewdarmwindeadarmwinderdarmwindeadarmwinde darmwindeedarmwindetdarmwinde darmwindeadarmwindeldarmwinde.darmwinde darmwinde(darmwinde1darmwinde9darmwinde8darmwinde3darmwinde)darmwinde darmwindeSdarmwindetdarmwinderdarmwindeudarmwindecdarmwindetdarmwindeudarmwinderdarmwindeedarmwinde darmwindeadarmwindendarmwindeddarmwinde darmwindeodarmwinderdarmwindegdarmwindeadarmwindendarmwindeidarmwindezdarmwindeadarmwindetdarmwindeidarmwindeodarmwindendarmwinde darmwindeodarmwindefdarmwinde darmwinderdarmwindeRdarmwindeNdarmwindeAdarmwinde darmwindeodarmwindepdarmwindeedarmwinderdarmwindeodarmwindendarmwindesdarmwinde darmwindeidarmwindendarmwinde darmwindetdarmwindehdarmwindeedarmwinde darmwinderdarmwindeedarmwindegdarmwindeidarmwindeodarmwindendarmwinde darmwindeodarmwindefdarmwinde darmwindetdarmwindehdarmwindeedarmwinde darmwinderdarmwindeedarmwindepdarmwindeldarmwindeidarmwindecdarmwindeadarmwindetdarmwindeidarmwindeodarmwindendarmwinde darmwindeodarmwinderdarmwindeidarmwindegdarmwindeidarmwindendarmwinde darmwindeodarmwindefdarmwinde darmwindetdarmwindehdarmwindeedarmwinde darmwinde'darmwinde'darmwindeBdarmwindeadarmwindecdarmwindeidarmwindeldarmwindeldarmwindeudarmwindesdarmwinde darmwindesdarmwindeudarmwindebdarmwindetdarmwindeidarmwindeldarmwindeidarmwindesdarmwinde'darmwinde'darmwinde darmwindecdarmwindehdarmwinderdarmwindeodarmwindemdarmwindeodarmwindesdarmwindeodarmwindemdarmwindeedarmwinde.darmwinde'darmwinde'darmwindeNdarmwindeudarmwindecdarmwindeldarmwinde.darmwinde darmwindeAdarmwindecdarmwindeidarmwindeddarmwindesdarmwinde darmwindeRdarmwindeedarmwindesdarmwinde.darmwinde'darmwinde'darmwinde darmwinde'darmwinde'darmwinde'darmwinde1darmwinde1darmwinde:darmwinde'darmwinde'darmwinde'darmwinde darmwinde6darmwinde3darmwinde0darmwinde1darmwinde-darmwinde6darmwinde3darmwinde1darmwinde8darmwinde.darmwinde darmwinde[darmwindehdarmwindetdarmwindetdarmwindepdarmwinde:darmwinde/darmwinde/darmwindewdarmwindewdarmwindewdarmwinde.darmwindendarmwindecdarmwindebdarmwindeidarmwinde.darmwindendarmwindeldarmwindemdarmwinde.darmwindendarmwindeidarmwindehdarmwinde.darmwindegdarmwindeodarmwindevdarmwinde/darmwindesdarmwindeidarmwindetdarmwindeedarmwindesdarmwinde/darmwindeedarmwindendarmwindetdarmwinderdarmwindeedarmwindezdarmwinde/darmwinde6darmwinde3darmwinde1darmwinde2darmwinde4darmwinde1darmwinde8darmwinde darmwindePdarmwindeudarmwindebdarmwindeMdarmwindeedarmwindeddarmwinde]darmwinde
| + | |
| − | darmwinde
| + | =References= |
| − | darmwinde
| + | ==Reviews== |
| | + | <pubmed> 18279655 </pubmed> |
| | + | |
| | + | ==The ''glmS'' Ribozyme== |
| | + | <pubmed>18079181 ,16484375, 16784238 ,15096624 , 16990543 ,17114942 ,16484375 , 15029187, 17283212 , 16298301, 19228039 21317896 21395279 </pubmed> |
| | + | |
| | + | ==Other Original Publications== |
| | + | '''Additional publications:''' {{PubMed|22211522}} |
| | + | <pubmed> 14343123 17981983 ,11160890, 18295797 20525796 </pubmed> |
| | + | [[Category:Protein-coding genes]] |
