ydaT

168

general stress protein, survival of ethanol stress and low temperatures, may be involved in DNA damage repair

Locus: BSU_04380

Molecular weight: 16.42 kDa

Isoelectric point: 5.97

Protein length: 150 aa

Gene length: 453 bp

Function: survival of ethanol stress and low temperatures

Product: unknown

Essential: no

E.C.: null

Synonyms: ydaT

Genomic Context

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List of homologs in different organisms, belongs to COG4876 (Galperin et al., 2021)

Gene

Coordinates: 492,989 → 493,441

The protein

Catalyzed reaction/ biological activity

• binds to 8-oxoG and abasic DNA lesions PubMed

Structure

• P96595 (AlphaFold)

Expression and Regulation

Operons

• Genes: ydaT-ydaS

  Description: PubMed

  Regulation

  • induced by stress (SigB) PubMed

  Sigma factors

  • SigB: sigma factor, PubMed, in sigB regulon

Biological materials

Mutant

• MGNA-C091 (ydaT::erm), available at the NBRP B. subtilis, Japan
• BKE04380 (ΔydaT::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTCTATCACTCCTTTTC,  downstream forward: _UP4_TAAAGGAATATGCTTTCAAG
• BKK04380 (ΔydaT::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTCTATCACTCCTTTTC,  downstream forward: _UP4_TAAAGGAATATGCTTTCAAG

References

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