ydaF

168

similar to acetyltransferase

Locus: BSU_04210

Molecular weight: 20.88 kDa

Isoelectric point: 5.56

Protein length: 183 aa

Gene length: 552 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: ydaF

Genomic Context

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Categories containing this gene/protein

Lifestyles, Coping with stress, General stress proteins (controlled by SigB)

Groups of genes, Poorly characterized/ putative enzymes

List of homologs in different organisms, belongs to COG1670 (Galperin et al., 2021)

Gene

Coordinates: 473,174 → 473,725

The protein

Protein family

Acetyltransferase family (according to UniProt)

Domains

N-acetyltransferase domain (aa 10-176) (according to UniProt)

Structure

1NSL (PDB)\tPubMed
P96579 (AlphaFold)

Paralogous protein(s)

YjcK

Expression and Regulation

Operons

Genes: ydaF-ydaG

Description: PubMed

Genes: ydaD-ydaE-ydaF-ydaG

Description: PubMed

Regulation

induced by stress (SigB) PubMed

Expression

expression is increased upon depletion of depletion of tRNA maturation factors rnpB or rnz PubMed

Sigma factors

SigB: sigma factor, PubMed, in sigB regulon

Biological materials

Mutant

MGNA-C088 (ydaF::erm), available at the NBRP B. subtilis, Japan
BKE04210 (ΔydaF::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTGCCTCGCCCTCTTTCC,  downstream forward: _UP4_TAAAGAGCACACTTTCTTGT
BKK04210 (ΔydaF::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTGCCTCGCCCTCTTTCC,  downstream forward: _UP4_TAAAGAGCACACTTTCTTGT

References

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