Difference between revisions of "BsrD"
(New page: * '''Description:''' small RNA <br/><br/> {| align="right" border="1" cellpadding="2" |- |style="background:#ABCDEF;" align="center"|'''Gene name''' |''bsrD'' |- |style="background:#ABCD...) |
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|style="background:#ABCDEF;" align="center"| '''Gene length''' || bp | |style="background:#ABCDEF;" align="center"| '''Gene length''' || bp | ||
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| − | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yddM]]'', ''[[yddN]]'' |
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE.txt Gene sequence (+200bp) ]''' | |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE.txt Gene sequence (+200bp) ]''' | ||
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|colspan="2" | '''Genetic context''' <br/> [[Image:genE_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:genE_context.gif]] | ||
| + | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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|} | |} | ||
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<br/><br/><br/><br/><br/> | <br/><br/><br/><br/><br/> | ||
| + | = [[Categories]] containing this gene/protein = | ||
| + | {{SubtiWiki category|[[ncRNA]]}} | ||
| + | |||
| + | = This gene is a member of the following [[regulons]] = | ||
| + | |||
| + | |||
=The gene= | =The gene= | ||
=== Basic information === | === Basic information === | ||
| − | * ''' | + | * '''Locus tag:''' |
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=?&redirect=T ?] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
| Line 46: | Line 54: | ||
=== Additional information=== | === Additional information=== | ||
| + | |||
| + | |||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''bsrD'' {{PubMed|18948176}} |
* '''Sigma factor:''' | * '''Sigma factor:''' | ||
| Line 77: | Line 87: | ||
=References= | =References= | ||
| − | + | <pubmed>18948176, </pubmed> | |
| + | |||
| + | [[Category:small RNA]] | ||
Latest revision as of 15:23, 2 April 2014
- Description: small RNA
| Gene name | bsrD |
| Synonyms | |
| Essential | no |
| Product | small RNA |
| Function | unknown |
| Gene length | bp |
| Immediate neighbours | yddM, yddN |
| Gene sequence (+200bp) | |
| Genetic context File:GenE context.gif This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
Database entries
- BsubCyc: ?
- DBTBS entry: no entry
- SubtiList entry: no entry
- Structure:
Additional information
Expression and regulation
- Operon: bsrD PubMed
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
Labs working on this gene/RNA
Kouji Nakamura, Tsukuba, University, Japan
Your additional remarks
References
Shinichi Saito, Hiroshi Kakeshita, Kouji Nakamura
Novel small RNA-encoding genes in the intergenic regions of Bacillus subtilis.
Gene: 2009, 428(1-2);2-8
[PubMed:18948176]
[WorldCat.org]
[DOI]
(P p)
