ydeB

168

similar to transcriptional regulator

Locus: BSU_05130

Molecular weight: 17.60 kDa

Isoelectric point: 7.33

Protein length: 153 aa

Gene length: 462 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: ydeB

Genomic Context

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Categories containing this gene/protein

Information processing, Regulation of gene expression, Transcription factors and their control, Transcription factor/ other/ based on similarity

List of homologs in different organisms, belongs to COG1329 (Galperin et al., 2021)

Gene

Coordinates: 560,151  560,612

The protein

Protein family

CarD family (single member, according to UniProt)

Structure

4KBM (PDB) (from Mycobacterium tuberculosis, 35%) PubMed
P96659 (AlphaFold)

Expression and Regulation

Operons

Genes: ydeB

Description: PubMed

Biological materials

Mutant

MGNA-C129 (ydeB::erm), available at the NBRP B. subtilis, Japan
BKE05130 (ydeB::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATATCATCCACCTCCATAT,  downstream forward: _UP4_TAGATACATCCCAAAAGATA
BKK05130 (ydeB::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATATCATCCACCTCCATAT,  downstream forward: _UP4_TAGATACATCCCAAAAGATA

References

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